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{% from "base_macro.html" import header %}
{% block content %}
{{ header("Mapping",
'{}: {}'.format(this_trait.name, this_trait.description_fmt)) }}
<div class="container">
<div>
<h2>
Whole Genome Mapping
</h2>
<form style ='float: left; padding: 5px;' id="exportform" action="export" method="post">
<input type="hidden" id="data" name="data" value="">
<input type="hidden" id="filename" name="filename" value="">
<input type="submit" id="export" value="Download SVG">
</form>
<form style ='float: left; padding: 5px;' id="exportpdfform" action="export_pdf" method="post">
<input type="hidden" id="data" name="data" value="">
<input type="hidden" id="filename" name="filename" value="">
<input type="submit" id="export_pdf" value="Download PDF">
</form>
<button id="return_to_full_view" class="btn" style="display:none">Return to full view</button>
</div>
<div id="chart_container">
<div class="qtlcharts" id="topchart">
</div>
</div>
<div style="width:60%;">
<h2>
Results
</h2>
<table id="qtl_results" class="table table-hover table-striped">
<thead>
<tr>
<th></th>
<th>Index</th>
<th>{{ score_type }}</th>
<th>Chr</th>
{% if mapping_scale == "centimorgan" %}
<th>cM</th>
{% else %}
<th>Mb</th>
{% endif %}
<th>Locus</th>
</tr>
</thead>
<tbody>
{% for marker in qtl_results %}
{% if (score_type == "LOD" and marker.lod_score > cutoff) or
(score_type == "LRS" and marker.lrs_value > cutoff) %}
<tr>
<td>
<input type="checkbox" name="selectCheck"
class="checkbox edit_sample_checkbox"
value="{{ marker.name }}" checked="checked">
</td>
<Td align="right">{{ loop.index }}</Td>
{% if score_type == "LOD" %}
<td>{{ '%0.2f' | format(marker.lod_score|float) }}</td>
{% else %}
<td>{{ '%0.2f' | format(marker.lrs_value|float) }}</td>
{% endif %}
<td>{{marker.chr}}</td>
<td>{{ '%0.6f' | format(marker.Mb|float) }}</td>
<td>
{{ marker.name }}
<!--<a href="{{ url_for('show_trait_page',
trait_id = marker.name,
dataset = dataset.name
)}}">
{{ marker.name }}
</a>-->
</td>
</tr>
{% endif %}
{% endfor %}
</tbody>
</table>
</div>
</div>
<!-- End of body -->
{% endblock %}
{% block js %}
<script>
js_data = {{ js_data | safe }}
</script>
<script type="text/javascript" charset="utf-8">
$(document).ready( function () {
console.time("Creating table");
$('#qtl_results').dataTable( {
"columns": [
{ "type": "natural", "bSortable": false },
{ "type": "natural" },
{ "type": "natural" },
{ "type": "natural" },
{ "type": "natural" },
{ "type": "natural" }
],
"buttons": [
'csv'
],
"sDom": "RZBtir",
"iDisplayLength": -1,
"autoWidth": true,
"bDeferRender": true,
"bSortClasses": false,
"scrollY": "700px",
"scrollCollapse": true,
"paging": false
} );
console.timeEnd("Creating table");
});
</script>
{% endblock %}
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