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{% extends "base.html" %}
{% block title %}Search Results{% endblock %}
{% block css %}
<link rel="stylesheet" type="text/css" href="{{ url_for('css', filename='DataTables/css/jquery.dataTables.css') }}" />
<link rel="stylesheet" type="text/css" href="{{ url_for('css', filename='jquery-ui/jquery-ui.theme.css') }}"/>
<link rel="stylesheet" type="text/css" href="/static/new/css/show_trait.css" />
{% endblock %}
{% block content %}
<!-- Start of body -->
<div class="container">
<div class="row">
<h3>GN searched for the term(s) <b>"{{ terms }}"</b> in 754 datasets and 39,765,944 traits across 10 species<br/>
and found <b>{{ trait_count }}</b> results that match your query.<br/>
</h3>
</div>
{% if do_ai_search %}
<div class="row" id="ai_result">
<div class="text-center" id="spinner">
<i class="fa fa-spinner fa-spin fa-3x"></i>
</div>
</div>
{% endif %}
<p>To study a record, click on its Record ID below.<br />Check records below and click Add button to add to selection.</p>
<div>
<br />
<button class="btn btn-default" id="select_all"><span class="glyphicon glyphicon-ok"></span> Select All</button>
<button class="btn btn-default" id="deselect_all"><span class="glyphicon glyphicon-remove"></span> Deselect All</button>
<button class="btn btn-default" id="invert"><span class="glyphicon glyphicon-resize-vertical"></span> Invert</button>
<button class="btn btn-success" id="add" disabled ><span class="glyphicon glyphicon-plus-sign"></span> Add</button>
<input type="text" id="searchbox" class="form-control" style="width: 180px; display: inline;" placeholder="Search This Table For ...">
<input type="text" id="select_top" class="form-control" style="width: 120px; display: inline;" placeholder="Select Top ...">
<form id="export_form" method="POST" action="/export_traits_csv" style="display: inline;">
<input type="hidden" name="headers" id="headers" value="{% for field in header_fields %}{{ field }},{% endfor %}">
<input type="hidden" name="database_name" id="database_name" value="None">
<input type="hidden" name="export_data" id="export_data" value="">
<button class="btn btn-default" id="export_traits">Download</button>
</form>
<br />
<br />
<div id="table_container" style="width: 2000px;">
<table id="trait_table" class="table-hover table-striped cell-border" style="float: left;">
<tbody>
<td colspan="100%" align="center"><br><b><font size="15">Loading...</font></b><br></td>
</tbody>
</table>
</div>
</div>
</div>
<!-- End of body -->
{% endblock %}
{% block js %}
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='js_alt/md5.min.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTables/js/jquery.dataTables.min.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/scroller/js/dataTables.scroller.min.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='jszip/jszip.min.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/plugins/sorting/natural.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/colReorder/js/dataTables.colReorder.js') }}"></script>
<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/colResize/dataTables.colResize.js') }}"></script>
<script language="javascript" type="text/javascript" src="/static/new/javascript/search_results.js"></script>
<script language="javascript" type="text/javascript" src="/static/new/javascript/table_functions.js"></script>
<script language="javascript" type="text/javascript" src="/static/new/javascript/create_datatable.js"></script>
<script type='text/javascript'>
var getParams = function(url) {
let parser = document.createElement('a');
parser.href = url;
let params = parser.search.substring(1);
if(params.length > 0) {
return ('?'+params);
}
return params;
};
</script>
<script type='text/javascript'>
var traitsJson = {{ trait_list|safe }};
</script>
<script type="text/javascript" charset="utf-8">
$(document).ready( function () {
var tableId = "trait_table";
columnDefs = [
{
'orderDataType': "dom-checkbox",
'width': "5px",
'data': null,
'targets': 0,
'render': function(data) {
return '<input type="checkbox" name="searchResult" class="trait_checkbox checkbox" value="' + data.hmac + '">'
}
},
{
'title': "Index",
'type': "natural",
'width': "30px",
'targets': 1,
'data': "index",
'defaultContent': "N/A"
},
{
'title': "Record",
'type': "natural",
'orderDataType': "dom-inner-text",
'width': "60px",
'data': null,
'targets': 2,
'render': function(data) {
return '<a target="_blank" href="/show_trait?trait_id=' + data.name + '&dataset=' + data.dataset + '">' + data.name + '</a>'
}
},
{
'title': "Species",
'type': "natural",
'width': "60px",
'targets': 3,
'data': "species",
'defaultContent': "N/A"
},
{
'title': "Group",
'type': "natural",
'width': "150px",
'targets': 4,
'data': "group",
'defaultContent': "N/A"
},
{
'title': "Tissue",
'type': "natural",
'width': "150px",
'targets': 5,
'data': "tissue",
'defaultContent': "N/A"
},
{
'title': "Dataset",
'type': "natural",
'targets': 6,
'width': "320px",
'data': "dataset_fullname",
'defaultContent': "N/A"
},
{
'title': "Symbol",
'type': "natural",
'width': "60px",
'targets': 7,
'data': "symbol",
'defaultContent': "N/A"
},
{
'title': "Description",
'type': "natural",
'data': null,
'width': "120px",
'targets': 8,
'render': function(data) {
try {
return decodeURIComponent(escape(data.description))
} catch(err) {
return escape(data.description)
}
}
},
{
'title': "Location",
'type': "natural-minus-na",
'width': "125px",
'targets': 9,
'data': "location_repr",
'defaultContent': "N/A"
},
{
'title': "Mean",
'type': "natural-minus-na",
'orderSequence': [ "desc", "asc"],
'width': "30px",
'targets': 10,
'data': null,
'defaultContent': "N/A",
'render': function(data) {
if (data.mean > 100) {
return Math.log2(data.mean).toFixed(3)
} else {
return data.mean
}
}
},
{
'title': "<div style='text-align: right; padding-right: 10px;'>Peak</div> <div style='text-align: right;'>-logP <a href=\"{{ url_for('gn_docs_blueprint.glossary') }}#LRS\" target=\"_blank\" style=\"color: white;\"><sup>?</sup></a></div>",
'type': "natural-minus-na",
'width': "60px",
'targets': 11,
'data': "LRS_score_repr",
'defaultContent': "N/A",
'orderSequence': [ "desc", "asc"]
},
{
'title': "Peak Location",
'type': "natural-minus-na",
'width': "125px",
'targets': 12,
'data': "max_lrs_text",
'defaultContent': "N/A"
},
{
'title': "Additive<br>Effect<a href=\"{{ url_for('gn_docs_blueprint.glossary') }}#A\" target=\"_blank\" style=\"color: white;\"><sup>?</sup></a>",
'type': "natural-minus-na",
'width': "50px",
'targets': 13,
'data': "additive",
'defaultContent': "N/A",
'orderSequence': [ "desc", "asc"]
}
]
tableSettings = {
'createdRow': function ( row, data, index ) {
$('td', row).eq(0).attr("style", "text-align: center; padding: 0px 10px 2px 10px;");
$('td', row).eq(1).attr("align", "right");
$('td', row).eq(4).attr('title', $('td', row).eq(4).text());
if ($('td', row).eq(4).text().length > 30) {
$('td', row).eq(4).text($('td', row).eq(4).text().substring(0, 30));
$('td', row).eq(4).text($('td', row).eq(4).text() + '...')
}
$('td', row).eq(5).attr('title', $('td', row).eq(5).text());
if ($('td', row).eq(5).text().length > 35) {
$('td', row).eq(5).text($('td', row).eq(5).text().substring(0, 35));
$('td', row).eq(5).text($('td', row).eq(5).text() + '...')
}
$('td', row).eq(6).attr('title', $('td', row).eq(6).text());
if ($('td', row).eq(6).text().length > 60) {
$('td', row).eq(6).text($('td', row).eq(6).text().substring(0, 60));
$('td', row).eq(6).text($('td', row).eq(6).text() + '...')
}
$('td', row).eq(8).attr('title', $('td', row).eq(8).text());
if ($('td', row).eq(8).text().length > 60) {
$('td', row).eq(8).text($('td', row).eq(8).text().substring(0, 60));
$('td', row).eq(8).text($('td', row).eq(8).text() + '...')
}
$('td', row).slice(10,14).attr("align", "right");
$('td', row).eq(1).attr('data-export', $('td', row).eq(1).text());
$('td', row).eq(2).attr('data-export', $('td', row).eq(2).text());
$('td', row).eq(3).attr('data-export', $('td', row).eq(3).text());
$('td', row).eq(4).attr('data-export', $('td', row).eq(4).text());
$('td', row).eq(5).attr('data-export', $('td', row).eq(5).text());
$('td', row).eq(6).attr('data-export', $('td', row).eq(6).text());
$('td', row).eq(7).attr('data-export', $('td', row).eq(7).text());
$('td', row).eq(8).attr('data-export', $('td', row).eq(8).text());
$('td', row).eq(9).attr('data-export', $('td', row).eq(9).text());
$('td', row).eq(10).attr('data-export', $('td', row).eq(10).text());
$('td', row).eq(11).attr('data-export', $('td', row).eq(11).text());
$('td', row).eq(12).attr('data-export', $('td', row).eq(12).text());
$('td', row).eq(13).attr('data-export', $('td', row).eq(13).text());
},
{% if trait_count <= 20 %}
"scroller": false
{% else %}
"scroller": true
{% endif %}
}
if (traitsJson.length > 0) {
create_table(tableId, traitsJson, columnDefs, tableSettings);
} else {
$("#" + tableId +" td").replaceWith("<td>No data</td>")
}
});
</script>
{% if do_ai_search %}
<script type='text/javascript'>
function ai_content_div(search_term, search_result, search_uri) {
return `
<div class="col-sm-6">
<div class="panel panel-info">
<div class="panel-heading" role="tab" id="ai_heading">
<h4 class="panel-title">
<a class="collapsed" role="button" data-toggle="collapse" data-parent="#accordion" href="#ai_results" aria-expanded="false" aria-controls="ai_results">
AI Search: ${search_term} (Click for more details)
</a>
</h4>
</div>
<div id="ai_results" class="panel-collapse collapse" role="tabpanel" aria-labelledby="ai_heading">
<div class="panel-body">
<p>${ search_result }</p>
<p><a class="btn btn-default" href="${ search_uri }" role="button">See References</a></p>
</div>
</div>
</div>
</div>
`
}
$(document).ready( function () {
$.ajax({url: "gnqna",
contentType: "application/json",
data: {
query: "{{ terms }}",
type: "xapian",
},
success: function(result) {
let ai_div = ai_content_div(result.search_term, result.search_result, result.search_url)
$("#ai_result").append(ai_div);
},
complete: function() {
$("#spinner").hide();
}
})
})
</script>
{% endif %}
{% endblock %}
|
