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;;; This file describes a Guix system container to run the database
;;; services required by genenetwork2 locally on your own
;;; machine. This is to allow a purely offline development setup for
;;; hacking on genenetwork2. To build and run the container, use
;;; db-container.sh.
(use-modules (gnu)
(gnu packages databases)
(gnu services databases))
(define %mariadb-state-directory
"/var/lib/mysql")
(define set-permissions-gexp
(with-imported-modules '((guix build utils))
#~(begin
(use-modules (guix build utils))
;; Set ownership of mariadb state directory.
(let ((user (getpw "mysql")))
(for-each (lambda (file)
(chown file (passwd:uid user) (passwd:gid user)))
(find-files #$%mariadb-state-directory #:directories? #t))))))
(operating-system
(host-name "genenetwork2")
(timezone "Etc/UTC")
(locale "en_US.utf8")
(bootloader (bootloader-configuration
(bootloader grub-bootloader)
(targets (list "does-not-matter"))))
(file-systems %base-file-systems)
(packages (cons mariadb ;; for the mysql CLI client
%base-packages))
(services (cons* (service mysql-service-type)
(service redis-service-type)
(simple-service 'set-permissions
activation-service-type
set-permissions-gexp)
%base-services)))
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