| Age | Commit message (Expand) | Author |
|---|---|---|
| 2023-11-30 | Remove duplicate month field in Phenotypes page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Fix dataset page links in Phenotypes UI page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Handle display for unpublished data...Example: http://cd.genenetwork.org/phenotypes/BXD_17019 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Add "Peak Location" in phenotypes display....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Refine display of publication details in phenotype template....* wqflask/wqflask/templates/phenotype.html: Use "metadata.references" to fetch publication details. Replace LRS value with LOD Score ("Peak -logP"). Rename "Additive" -> "Effect Size." Replace "Title" with "Publication." Use "ANSI/NISO Z39.29-2005(R2010)" format for displaying publications details. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Use correct field to fetch the additive value....* wqflask/wqflask/templates/phenotype.html: Use the correct field to fetch the additive value. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Remove text-underline for phenotype page-header....* wqflask/wqflask/templates/phenotype.html: Remove underline. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-30 | Update phenotype retrieval route, incorporate group parameter....* wqflask/wqflask/views.py (get_phenotype): Add "group" parameter. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-29 | Remove set operator when fetching correlation metadata...I'm not sure why this was introduced in the first place, but it appears to cause an issue where a semicolon is displayed in the description even when there's no probe target description (and removing it doesn't seem to cause any problems) | zsloan |
| 2023-11-27 | Change info file links + make them open in new tabs | zsloan |
| 2023-11-27 | Rename metadata/genotype -> metadata/genotypes....* wqflask/wqflask/views.py (get_genotype): Rename genotype -> genotypes. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Update genotype UI page....* wqflask/wqflask/templates/genotype.html: Update page. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Update the phenotype page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Rename "/phenotype" -> "phenotypes" endpoint....* wqflask/wqflask/views.py (get_phenotype): Rename "/phenotype" -> "phenotypes". Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Revamp UI page for publications....* wqflask/wqflask/templates/publication.html: Update UI. When a particular metadata item does not show up, show "N/A" instead. * wqflask/wqflask/views.py (get_publication): Rename "publication"->"publications". Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Remove javascript integrity check for HTMX....Firefox will always give the following error: None of the “sha384” hashes in the integrity attribute match the content of the subresource. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Point htmx to the correct endpoint for dataset search....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Use correct src for htmx....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Improve search-box styling....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Update the lead and place-holder copy for dataset search....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Improve the dataset's styling....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Refactor template to use new json-ld format....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Float the details panel only when metadata exists....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Refactor route and metadata retrieval process for dataset details....* wqflask/wqflask/views.py (get_dataset): Rename "/dataset..." -> "/datasets...". Remove url parsing for metadata keys since we use json-ld now. Remove pull-right check. Only pass the metadata to the template. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Add search bar if a there's a URL miss when displaying data....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Make dataset it's own html entity....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Get the last element from url in the key....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Rename metadata to dataset....* wqflask/wqflask/templates/metadata/dataset.html: Rename metadata to dataset. * wqflask/wqflask/views.py (get_dataset): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Use correct fields when fetching a dataset's metadata....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Move dataset template to metadata directory....* wqflask/wqflask/templates/dataset.html: Move this ... * wqflask/wqflask/templates/metadata/dataset.html: here. Also, add htmx library. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-27 | Delete dead comment....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-11-25 | Fix bug caused by NaN p-values in GEMMA mapping | zsloan |
| 2023-11-17 | Log out query errors...Log out failures in querying the database as errors to help with catching issues with and debugging of queries. | Frederick Muriuki Muriithi |
| 2023-11-13 | Fix bug that caused hitting Enter on regular search after hitting Enter for g... | zsloan |
| 2023-11-13 | Secrets: Enable separate secrets settings file...Enable a separate secrets settings file to be provided where necessary. The secrets settings file will hold security-critical configuration values that should not be exposed in the repository. | Frederick Muriuki Muriithi |
| 2023-11-09 | Set correlation table width to 90% | zsloan |
| 2023-11-09 | Make adjustments to correlation table...- Disable scroller when fewer than 2000 rows. Scroller causes a problem where you can't reach certain rows when manually scroller when rows are too 'tall' (so when descriptions are long and the window is smaller) - Disable width for Abbreviation and increase width for Peak Position so it doesn't get pushed to two lines | zsloan |
| 2023-11-06 | Revert "Disable SSL check when checking whether user is logged in."...This reverts commit b178e8f8944141632032103fb5b06e3a0746d4f3. | Munyoki Kilyungi |
| 2023-11-06 | Disable SSL check when checking whether user is logged in....* wqflask/wqflask/views.py (index_page): Set "verify=False" in no_token_get. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2023-10-26 | case-attribute: approve/reject diff...Make calls to the API server to approve or reject a diff, depending on the user's actions. Clean up the UI elements to remove debug artifacts. | Frederick Muriuki Muriithi |
| 2023-10-26 | case-attributes: View the diffs. | Frederick Muriuki Muriithi |
| 2023-10-26 | CaseAttribute: List out the diffs...List out the diffs and create placeholders for active elements that do not yet have the back-end code that handles them. | Frederick Muriuki Muriithi |
| 2023-10-26 | CaseAttributes: Provide UI for diffs list. | Frederick Muriuki Muriithi |
| 2023-10-26 | CaseAttribute: Add link to enable editing case attributes. | Frederick Muriuki Muriithi |
| 2023-10-26 | Rework "success" function. | Frederick Muriuki Muriithi |
| 2023-10-26 | CaseAttributes: Bug: Fix query. | Frederick Muriuki Muriithi |
| 2023-10-26 | Fix URL: Make requests to GN3 not gn-auth...Provide a "wrapped" requests module that returns an Either monad rather than a request directly. Send requests to GN3 rather than gn-auth | Frederick Muriuki Muriithi |
| 2023-10-26 | Use auth-server for authentication...Authenticate with the Auth-server (gn-auth) to get the token to use on the API server (GN3). | Frederick Muriuki Muriithi |
| 2023-10-26 | Call utils to replace unnecessary functions. | Frederick Muriuki Muriithi |
| 2023-10-26 | Process data before sending to API | Frederick Muriuki Muriithi |
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