genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2022-10-06	DEBUG: Collect more info to debug CI/CD	Frederick Muriuki Muriithi
2022-10-06	Check for incompatible datasets for various correlation types.	Frederick Muriuki Muriithi
2022-10-05	fix bug use target dataset for top n correlation	Alexander_Kabui
2022-10-05	remove data preprocessing for top n samples	Alexander_Kabui
2022-10-05	Handle correlation error	Frederick Muriuki Muriithi
2022-10-05	Bug: Check for compatible datasets for a correlation type	Frederick Muriuki Muriithi
2022-10-05	bug: Use target dataset when computing tissue correlations	Frederick Muriuki Muriithi
2022-10-04	Fix bug where dataset_name was being passed into get_samplelist query instead...	zsloan
2022-10-04	Pass redis_conn to get_samplelist	zsloan
2022-10-04	Initialize result_list for /traits endpoint JSON output	zsloan
2022-10-04	Remove unnecessary variable	Frederick Muriuki Muriithi
2022-10-04	Add more information to exception to help in debugging	Frederick Muriuki Muriithi
2022-10-03	Bug: Don't process data for output early	Frederick Muriuki Muriithi
2022-09-30	Reformat statement	Frederick Muriuki Muriithi
2022-09-30	Remove unused table and simplify query	Frederick Muriuki Muriithi
2022-09-30	Raise hard-limit on search results to 10k.	Arun Isaac
2022-09-30	Disregard permissions when displaying search results.	Arun Isaac
2022-09-29	Fix identation issues in attribute query code	zsloan
2022-09-29	Curry function passed to Maybe.apply.	Arun Isaac
2022-09-29	Hard-limit the number of search results.	Arun Isaac
2022-09-29	Support prefix search and range queries.	Arun Isaac
2022-09-29	Retrieve year as integer.	Arun Isaac
2022-09-29	Index prefixed fields and add values.	Arun Isaac
2022-09-29	Replace MonadicDictCursor with generator function.	Arun Isaac
2022-09-29	Open xapian database once, but SQL database once for each query.	Arun Isaac
2022-09-29	Remove empty first line in docstrings.	Arun Isaac
2022-09-29	Ignore None values early when initializing MonadicDict.	Arun Isaac
2022-09-29	Return monadic value from MonadicDictCursor.fetchone.	Arun Isaac
2022-09-29	Abstract out writing documents into a xapian database.	Arun Isaac
2022-09-29	Close xapian database even if error occurs.	Arun Isaac
2022-09-29	Remove empty rows, and conversion for output	Frederick Muriuki Muriithi
2022-09-28	Do not assume transactions in database connections.	Arun Isaac
2022-09-27	Fix indentation in get_species_list for-loop	zsloan
2022-09-27	Unit Test: Fix unit test for Chromosome functions.	Frederick Muriuki Muriithi
2022-09-26	Add REST API endpoint for viewing a group's genotype file metadata	zsloan
2022-09-26	Get heatmap and mapping working again with changing to species.py	zsloan
2022-09-26	Remove unused database_connection import from species.py	zsloan
2022-09-26	Implement global search using xapian.	Arun Isaac
2022-09-26	Add indexing script for global search.	Arun Isaac
2022-09-26	Add xapian database connection utilities.	Arun Isaac
2022-09-26	Generalize sql_uri function to get any setting.	Arun Isaac
2022-09-25	Fix issue where the display name was used in the hmac for phenotype traits	zsloan
2022-09-23	Remove click handler on global search.	Arun Isaac
2022-09-22	Fix bug in GeneUtil.py query where extra quotes caused an error	zsloan
2022-09-22	Use passed in cursor instead of initialising a new cursor.	Frederick Muriuki Muriithi
2022-09-22	Provide database cursor as argument for TheSpecies and Chromosomes	Frederick Muriuki Muriithi
2022-09-22	Update tests: pass in missing arguments.	Frederick Muriuki Muriithi
2022-09-21	Added Markers/HumanMarkers import to datasetgroup.py and removed it from	zsloan
2022-09-21	Refactor: pass redis and db connections as argument	Frederick Muriuki Muriithi
2022-09-20	Make -logP columns uniform	zsloan