Age | Commit message (Expand) | Author |
---|---|---|
2020-07-29 | Reformat sql queries to be one line...* wqflask/wqflask/api/gen_menu.py (get_species, get_groups, phenotypes_exist) (genotypes_exist)[sql]: Strip white spaces and newlines from query and make the sql query one line. | BonfaceKilz |
2020-07-29 | Add tests for "phenotypes_exist" and "genotypes_exist"...* wqflask/tests/api/test_gen_menu.py: Add new tests | BonfaceKilz |
2020-07-29 | Add test for "get_groups"...* wqflask/tests/api/test_gen_menu.py: test that "get_groups" uses the correct sql query and returns the correct group data structure. | BonfaceKilz |
2020-07-29 | Add initial gen_menu test...* wqflask/tests/api/__init__.py: Add it * wqflask/tests/api/test_gen_menu.py: Add test for get_species | BonfaceKilz |
2020-07-28 | Fixes issue where zooming in on mapping results in some browsers caused...the original tab's contents to be removed * wqflask/wqflask/templates/mapping_results.html: minor change to add spaces for readability * wqflask/wqflask/marker_regression/display_mapping_results.py: Removed "return" from chrView and rangeView since it appears to remove original tab's contents in some browers when submitting form | zsloan |
2020-07-27 | Clean up webqtlCaseData class...* wqflask/base/webqtlCaseData.py (webqtlCaseData): - Remove obsolete 'Object' from Class inheritance - Replace 'str' with 'case_data_string' variable- it collides with python in-builts - Use pythonic 'is Not None' form - Remove redundancy in 'if' forms - Update copyright header | BonfaceKilz |
2020-07-27 | Add unittests for WebqtlCaseData...* wqflask/tests/base/test_webqtl_case_data.py: Add it | BonfaceKilz |
2020-07-27 | Abstract away redundant code into set_dataset_key method...* wqflask/base/data_set.py (Dataset): - Add set_dataset_key - Remove __call__ method | BonfaceKilz |
2020-07-27 | Test that non-existent keys in Dataset are set correctly...* wqflask/tests/base/test_data_set.py: Add more tests. | BonfaceKilz |
2020-07-27 | Use the correct redis instance inside object...* wqflask/base/data_set.py (DatasetType): Use object's redis instance | BonfaceKilz |
2020-07-27 | Check that Redis is called correctly...* wqflask/tests/base/test_data_set.py: assert that `set` and `get` are called correctly | BonfaceKilz |
2020-07-27 | Add test case for empty redis instance for DatasetType...* wqflask/tests/base/test_data_set.py(tests): Check correct results are returned when Redis is empty * wqflask/tests/base/data.py(tests): New file. Adds json test data. | BonfaceKilz |
2020-07-27 | Apply py-lint...* wqflask/tests/base/test_data_set.py: Apply pylint | BonfaceKilz |
2020-07-25 | The variable is never defined, so let's default to "none" | Pjotr Prins |
2020-07-25 | Animated gifs | Pjotr Prins |
2020-07-25 | Removing bimbam check. We'll get rid of bimbam anyway. | Pjotr Prins |
2020-07-24 | Merge pull request #409 from BonfaceKilz/Build/add-tests...Build/add tests | zsloan |
2020-07-24 | Added missing JS library that caused adding markers to collections to not work | zsloan |
2020-07-24 | Minor aesthetic indentation change in html | zsloan |
2020-07-24 | Added to menu option for user to change some basic user information, like nam... | zsloan |
2020-07-24 | Fixed queries that were wrongly returning Data IDs as Ns | zsloan |
2020-07-24 | Rename test_numify.py to test_formatting.py | BonfaceKilz |
2020-07-24 | Add unittests for *utility/test_numify* | BonfaceKilz |
2020-07-24 | Revert "Add work-around for failed imports in unittest"...This reverts commit d5e87fa6fe7546b46790f512d984a5501223082f. | BonfaceKilz |
2020-07-24 | Add work-around for failed imports in unittest...* wqflask/utility/tools.py: Unittests will use `from wqflask.wqflask import app` and the gn2 script will use `from wqflask import app` | BonfaceKilz |
2020-07-24 | Remove unreachable conditional...* wqflask/base/GeneralObject.py(__getattr__): remove if statement that is unreachable | BonfaceKilz |
2020-07-24 | Add more tests for general_object...* wqflask/tests/base/test_general_object.py: test getattr() and `==` | BonfaceKilz |
2020-07-24 | Add more tests for GeneralObject...* wqflask/tests/base/test_general_object.py: test object's magic methods | BonfaceKilz |
2020-07-24 | Move .coveragerc to wqflask/...* .coveragerc: Move .coveragerc to wqflask so that the coverage test tool can pick it up automatically without having to add an `--rc-file` flag | BonfaceKilz |
2020-07-24 | Rename test_numify.py to test_formatting.py | BonfaceKilz |
2020-07-24 | Add unittests for *base/data_set* | BonfaceKilz |
2020-07-24 | Inject redis instance into DatasetType class...* wqflask/base/data_set.py(DatasetType): - Rename Redis instance to r to avoid confusion and name collisions - Inject the redis instance into Dataset_Types class to make it easier to test - Rename Dataset_Types class to DatasetType class | BonfaceKilz |
2020-07-24 | Add unittests for *utility/test_numify* | BonfaceKilz |
2020-07-24 | Apply autopep-8...* wqflask/utility/formatting.py: apply it | BonfaceKilz |
2020-07-24 | Add zero to num_repr dictionary...* wqflask/utility/formatting.py(numify): Update `num_repr` to have a zero | BonfaceKilz |
2020-07-24 | Remove redundant variable...* wqflask/utility/corr_result_helpers.py(normalize_values_with_values): Remove `num_overlap` | BonfaceKilz |
2020-07-24 | Remove unused assert...* wqflask/utility/corr_result_helpers.py(normalize_values): At no one point will that assert be hit | BonfaceKilz |
2020-07-24 | Remove unused doc-tests...* wqflask/utility/corr_result_helpers.py: Delete doc-test | BonfaceKilz |
2020-07-24 | Simplify normalize_values...* wqflask/utility/corr_result_helpers.py(normalize_values): Replace loop with zip form | BonfaceKilz |
2020-07-24 | Add unittests for *utility/corr_result_helper* | BonfaceKilz |
2020-07-24 | Add unittests for *utility/corestats* | BonfaceKilz |
2020-07-24 | Remove unused doc-tests...* wqflask/utility/chunks.py: Remove test code from module | BonfaceKilz |
2020-07-24 | Test utility methods for chunking...* wqflask/tests/utility/test_chunks.py: New test | BonfaceKilz |
2020-07-24 | Move tests to module...* test/unittest/: Move to wqflask/tests/ | BonfaceKilz |
2020-07-24 | Apply autopep-8...* wqflask/base/data_set.py: Apply autopep-8 | BonfaceKilz |
2020-07-24 | Revert "Add work-around for failed imports in unittest"...This reverts commit d5e87fa6fe7546b46790f512d984a5501223082f. | BonfaceKilz |
2020-07-24 | Apply autopep-8...* wqflask/base/GeneralObject.py: Replace tabs with 4 spaces | BonfaceKilz |
2020-07-24 | Remove mock directory...* wqflask/mock: Delete it. Causes name conflicts with Python's mock module | BonfaceKilz |
2020-07-24 | Add work-around for failed imports in unittest...* wqflask/utility/tools.py: Unittests will use `from wqflask.wqflask import app` and the gn2 script will use `from wqflask import app` | BonfaceKilz |
2020-07-24 | Remove unused config | BonfaceKilz |