Age | Commit message (Collapse) | Author | |
---|---|---|---|
2023-11-27 | Delete dead comment. | Munyoki Kilyungi | |
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
2023-11-25 | Fix bug caused by NaN p-values in GEMMA mapping | zsloan | |
2023-11-17 | Log out query errors | Frederick Muriuki Muriithi | |
Log out failures in querying the database as errors to help with catching issues with and debugging of queries. | |||
2023-11-13 | Fix bug that caused hitting Enter on regular search after hitting Enter for ↵ | zsloan | |
global search to wrongly submit global search instead | |||
2023-11-13 | Secrets: Enable separate secrets settings file | Frederick Muriuki Muriithi | |
Enable a separate secrets settings file to be provided where necessary. The secrets settings file will hold security-critical configuration values that should not be exposed in the repository. | |||
2023-11-09 | Set correlation table width to 90% | zsloan | |
2023-11-09 | Make adjustments to correlation table | zsloan | |
- Disable scroller when fewer than 2000 rows. Scroller causes a problem where you can't reach certain rows when manually scroller when rows are too 'tall' (so when descriptions are long and the window is smaller) - Disable width for Abbreviation and increase width for Peak Position so it doesn't get pushed to two lines | |||
2023-11-06 | Revert "Disable SSL check when checking whether user is logged in." | Munyoki Kilyungi | |
This reverts commit b178e8f8944141632032103fb5b06e3a0746d4f3. | |||
2023-11-06 | Disable SSL check when checking whether user is logged in. | Munyoki Kilyungi | |
* wqflask/wqflask/views.py (index_page): Set "verify=False" in no_token_get. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
2023-10-26 | case-attribute: approve/reject diff | Frederick Muriuki Muriithi | |
Make calls to the API server to approve or reject a diff, depending on the user's actions. Clean up the UI elements to remove debug artifacts. | |||
2023-10-26 | case-attributes: View the diffs. | Frederick Muriuki Muriithi | |
2023-10-26 | CaseAttribute: List out the diffs | Frederick Muriuki Muriithi | |
List out the diffs and create placeholders for active elements that do not yet have the back-end code that handles them. | |||
2023-10-26 | CaseAttributes: Provide UI for diffs list. | Frederick Muriuki Muriithi | |
2023-10-26 | CaseAttribute: Add link to enable editing case attributes. | Frederick Muriuki Muriithi | |
2023-10-26 | Rework "success" function. | Frederick Muriuki Muriithi | |
2023-10-26 | CaseAttributes: Bug: Fix query. | Frederick Muriuki Muriithi | |
2023-10-26 | Fix URL: Make requests to GN3 not gn-auth | Frederick Muriuki Muriithi | |
Provide a "wrapped" requests module that returns an Either monad rather than a request directly. Send requests to GN3 rather than gn-auth | |||
2023-10-26 | Use auth-server for authentication | Frederick Muriuki Muriithi | |
Authenticate with the Auth-server (gn-auth) to get the token to use on the API server (GN3). | |||
2023-10-26 | Call utils to replace unnecessary functions. | Frederick Muriuki Muriithi | |
2023-10-26 | Process data before sending to API | Frederick Muriuki Muriithi | |
2023-10-26 | UI for case-attribute editing. | Frederick Muriuki Muriithi | |
2023-10-26 | Remove references to "group roles". | Frederick Muriuki Muriithi | |
2023-10-26 | Update template: remove group from resources | Frederick Muriuki Muriithi | |
2023-10-26 | Remove group from resource | Frederick Muriuki Muriithi | |
A resource is not linked directly to a user group any more. | |||
2023-10-26 | Update role view: Add link to resource. | Frederick Muriuki Muriithi | |
2023-10-26 | Fetch system roles from new `/auth/system/roles` endpoint. | Frederick Muriuki Muriithi | |
2023-10-26 | Use gn-auth as the authorisation server. | Frederick Muriuki Muriithi | |
2023-10-25 | Always cache mapping results for a month, even if Copy and Share isn't clicked | zsloan | |
2023-10-25 | Remove expiration time when caching mapping inputs | zsloan | |
2023-10-24 | Make DataTables automatically adjust columns are generating the table | zsloan | |
2023-10-24 | Prevent search result table from having the scroll bar not be visible at the ↵ | zsloan | |
edge of the browser window | |||
2023-10-11 | Fix placeholder text for correlation page Select Rows feature | zsloan | |
2023-10-11 | Re-enable filter options for correlations against phenotype traits | zsloan | |
2023-10-09 | collections: make POST requests | Frederick Muriuki Muriithi | |
Convert the requests that either create a new collection, or add traits to an existing collection to use the "POST" method, since such requests are not idempotent. | |||
2023-10-06 | Change WebGestalt URL to use HTTPS | zsloan | |
2023-10-06 | Provide default `CORRELATION_COMMAND` setting. Remove unused import. | Frederick Muriuki Muriithi | |
2023-10-03 | Include cached_trait parameter for scatterplot, so it knows which trait to ↵ | zsloan | |
use the cached data for | |||
2023-09-25 | Remove parents/f1s from Other sample group | zsloan | |
2023-09-25 | Invert rows/columns for multi-trait export | zsloan | |
2023-09-25 | Swap parameters for mapping scatterplot, since the genotype markers were ↵ | zsloan | |
being pulled from the dataid instead of the trait sample values | |||
2023-09-25 | Update function for getting number of collections in scatterplot page | zsloan | |
2023-09-21 | Fix the way id_ is accessed from existing_publication | zsloan | |
2023-09-21 | Remove check for collections from mapping cofactor selection UI | zsloan | |
2023-09-21 | Add update_cross_reference to imports | zsloan | |
2023-09-20 | Revert "Revert "Remove SECRET_KEY from mandatory start up check"" | Frederick Muriuki Muriithi | |
This reverts commit 89abbdd63840b1a1ea27f7dc8c5146563193b23a. | |||
2023-09-20 | Revert "Remove SECRET_KEY from mandatory start up check" | Frederick Muriuki Muriithi | |
This reverts commit 093cad933bfd241e993afbbd431d64efdd354e1d. | |||
2023-09-19 | Add links to GN-hosted portals | zsloan | |
2023-09-13 | Remove GN2 generif link. | Munyoki Kilyungi | |
* wqflask/wqflask/templates/show_trait_details.html: Delete GN2 generif link. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
2023-09-13 | add mastadon feed to homepage | Alexander_Kabui | |
2023-09-13 | Patch MySQLdb.escape_string to use use a connection. | Munyoki Kilyungi | |
* wqflask/utility/db_tools.py: Delete MySQLdb.escape_. Import get_setting, database_connection. (escape_): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> |