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| author | zsloan | 2023-09-25 19:27:52 +0000 |
|---|---|---|
| committer | zsloan | 2023-09-25 19:27:52 +0000 |
| commit | b4001d74419eb4aa05e9782776d8210faa218575 (patch) | |
| tree | 600d262ab92f089d2a2bc6c14a5a6a4998b870fb /wqflask | |
| parent | 0cfc0b7439554c385cca4acd835d4013dea63d75 (diff) | |
| download | genenetwork2-b4001d74419eb4aa05e9782776d8210faa218575.tar.gz | |
Remove parents/f1s from Other sample group
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/show_trait/show_trait.py | 5 |
1 files changed, 1 insertions, 4 deletions
diff --git a/wqflask/wqflask/show_trait/show_trait.py b/wqflask/wqflask/show_trait/show_trait.py index d695dec3..fc4df4b7 100644 --- a/wqflask/wqflask/show_trait/show_trait.py +++ b/wqflask/wqflask/show_trait/show_trait.py @@ -505,7 +505,7 @@ class ShowTrait: all_samples_ordered.append(sample) other_sample_names.append(sample) - # ZS: CFW is here because the .geno file doesn't properly + # CFW is here because the .geno file doesn't properly # contain its full list of samples. This should probably # be fixed. if self.dataset.group.species == "human" or (set(primary_sample_names) == set(parent_f1_samples)) or self.dataset.group.name == "CFW": @@ -527,9 +527,6 @@ class ShowTrait: # "human" and self.dataset.group.name != "CFW": if len(other_sample_names) > 0: other_sample_names.sort() # Sort other samples - if parent_f1_samples: - other_sample_names = parent_f1_samples + other_sample_names - other_samples = SampleList(dataset=self.dataset, sample_names=other_sample_names, this_trait=self.this_trait, |