index
:
genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
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Age
Commit message (
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Author
2020-06-17
Adding all the authentication stuff
zsloan
2020-06-05
Commiting other current group/resource management code, plus the new files
zsloan
2020-03-10
Added back macaque monkey to dropdown generation, not sure why it was removed...
zsloan
2019-12-09
Fixed minor issue that caused the sample list to be fetched incorrectly for a...
zsloan
2019-10-18
Added UniProt link and fixed issue that caused sample lists to not be formed ...
zsloan
2019-05-14
Added all of the third party links from GN1
zsloan
2019-04-04
Fixed issue where dataset_menu_structure.json included some groups with no vi...
zsloan
2019-04-03
Fixed an issue that caused global phenotype search to often not work and cert...
zsloan
2019-03-27
Changed gen_select_dataset.py to be able to show multiple datasets under the ...
zsloan
2018-12-21
Fixed collections so they can be very large (1000+ traits)
zsloan
2018-12-05
Fixed issue where SNP track for mapping did not appear correctly
zsloan
2018-11-20
Added option to select chromosome from trait page when mapping
zsloan
2018-10-11
- Added fix for GEMMA LOCO
zsloan
2018-10-01
- Can now remove cofactors from correlation scatterplot and select them by ju...
zsloan
2018-05-25
Fixed issue causing anonymous collections to not work on my branch and stagin...
zsloan
2018-05-17
Added script to quantile normalize a data set and enter its normalized sample...
zsloan
2018-04-23
Changed GEMMA mapping to use -lmm 2 (Likelihood ratio test) as a parameter in...
zsloan
2018-04-16
Resolved conflicts after pulling changes
zsloan
2018-04-12
README and docs
Pjotr Prins
2018-04-09
Removed unused code from get_select_dataset.py and get_group_samplelists.py s...
zsloan
2018-04-09
Removed unused code from convert_geno_to_bimbam.py and corestats.py
zsloan
2017-12-06
Fixed drop-down group order
zsloan
2017-12-04
Fixed drop-down scripts to more appropriately deal with BXD300 groups (though...
zsloan
2017-11-06
Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...
zsloan
2017-09-07
Added the script to convert bimbam to kinship matrices
zsloan
2017-09-05
Added file converting genofiles to bimbam
zsloan
2017-05-21
Merge from the diet branch.
Pjotr Prins
2017-02-08
Changed the way .fam files are written/read, which fixes the issue with GEMMA...
zsloan
2016-12-12
Moved a bunch of functions out of the GeneralTrait class that didn't need to ...
zsloan
2016-09-30
Add missing __init__.py
Pjotr Prins
2016-09-13
Fixed the path for the json file in gen_select_dataset.py since it was wrong ...
zsloan
2016-09-13
Run scripts from ./wqflask - just like the webserver
Pjotr Prins
2016-09-10
Comment
Pjotr Prins
2016-09-10
Support for running maintenance scripts so they can pick up all webserver set...
Pjotr Prins
2016-07-16
README: added info
Pjotr Prins
2016-06-19
Renamed settings so they are grouped together
Pjotr Prins
2016-06-18
Changed file permssions to non-executable
Pjotr Prins
2016-06-18
Disable setting sys.paths
Pjotr Prins
2016-06-17
Conflict
Pjotr Prins
2016-06-17
Removed trailing spaces in .py and .js files
Pjotr Prins
2016-06-16
Generating the menu is now obsolete
Pjotr Prins
2016-04-20
More hard-coded
pjotrp
2016-04-20
[PATCH 037/100] WebQtlConfig: sanitizing naming and used vars
Pjotr Prins
2016-02-18
Edited gen_select_dataset to remove confidential datasets
zsloan
2016-01-29
Info button should now work for phenotype and genotype datasets
zsloan
2016-01-27
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-01-27
Added info button to Dataset dropdown on index page
zsloan
2016-01-26
Removed a bunch of files/directories/packages that are no longer used and som...
zsloan
2015-07-09
Forgot to add one change to the last commit
zsloan
2015-07-09
Mapping methods now check for existing genotype files.
zsloan
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