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species.py
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Author
2022-09-08
Simplify how chromosomes are fetched
Munyoki Kilyungi
2022-09-08
Replace g.db with database_connection() context manager
Munyoki Kilyungi
2021-05-05
base: species: Remove redundant assignment
BonfaceKilz
2021-05-05
base: chromosomes: Fetch the chromosomes lazily
BonfaceKilz
2021-05-05
base: species: Rewrite Chromosomes using a dataclass
BonfaceKilz
2021-05-05
base: species: Rewrite IndChromosome using a dataclass
BonfaceKilz
2021-05-05
base: trait: Remove logging information
BonfaceKilz
2021-05-05
base: species: Rewrite TheSpecies class using a dataclass
BonfaceKilz
2021-05-05
base: species: Remove unused import
BonfaceKilz
2021-05-05
base: species: Format SQL queries
BonfaceKilz
2021-04-30
autopep8: Fix E501
BonfaceKilz
2021-04-30
autopep8: Fix E301,E302,E303,E304,E305,E306
BonfaceKilz
2021-04-30
autopep8: Fix E20-E27
BonfaceKilz
2021-04-29
Run `sed -i 's/(object)//g'`
BonfaceKilz
2020-08-27
Remove unused imports
BonfaceKilz
2020-08-26
Remove "from __future__ import new_feature" statements
BonfaceKilz
2018-10-11
- Added fix for GEMMA LOCO
zsloan
2018-04-06
Mapping figure output now gives more accurate information
zsloan
2016-06-23
Logger: SQL
Pjotr Prins
2016-06-18
Changed file permssions to non-executable
Pjotr Prins
2016-06-17
Removed trailing spaces in .py and .js files
Pjotr Prins
2014-06-25
Added Karl's correlation matrix code
Zachary Sloan
2014-05-05
Committing a bunch of changes related to integrating GEMMA and
Zachary Sloan
2013-06-26
Got code that creates DataSets object running
Zachary Sloan
2013-04-09
Nick's code works fine with human data
Zachary Sloan
2013-03-12
Got cashing working with pickle
Zachary Sloan
2013-01-08
Created IndChromosome class in species.py and wrote functions for
Zachary Sloan
2013-01-08
Deleted some unnecessary code in marker_regression.py and fixed some bugs
Zachary Sloan
2013-01-03
Began working on marker_regression.py and created Chromosomes class
Zachary Sloan
2012-12-18
Created new file species.py and species class object TheSpecies
Zachary Sloan