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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
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feature/textfile-generator
gn-master
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hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
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rework-genotype-linking
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stable
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GeneNetwork (2nd generation)
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data_set.py
Age
Commit message (
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Author
2020-04-27
Added timeout for when/if it does the REST API query, so it doesn't hang inde...
zsloan
2020-04-27
Made change that should allow dataset structure to be loaded from Redis inste...
zsloan
2020-04-26
Removed the code that was still writing the database menu JSON
zsloan
2020-04-24
Replaced hard-coded instances of GN2 urls with ones pulled from settings file
zsloan
2020-04-24
Made a fix that should prevent the issue where new datasets cause an error wh...
zsloan
2020-04-06
Added Mean column for phenotype traits in search and global search result tables
zsloan
2020-03-27
Fixed issue where GEMMA wasn't showing up for certain groups
zsloan
2020-03-27
Added integration for using RData files with R/qtl, plus some other changes t...
zsloan
2020-02-07
Users can now add and do mapping on genotype files that only include a subset...
zsloan
2019-12-04
Added M to the possible non-number 'chromosome' names
zsloan
2019-11-21
Added 3-letter codes to unpublished phenotype traits and fixed issue with ord...
zsloan
2019-11-14
Changed code to rebuild dataset list each time you view the trait page to avo...
zsloan
2019-11-05
Fixed issue with ordering items in correlation dataset select dropdown
zsloan
2019-10-24
Changed logic for generating drop-downs such that it shows the correct Phenot...
zsloan
2019-10-18
Added UniProt link and fixed issue that caused sample lists to not be formed ...
zsloan
2019-07-23
Added change to automatically update datasets list using rest api instead of ...
zsloan
2019-06-24
Got non-LOCO GEMMA mapping working with gemma-wrapper (so caching should work...
zsloan
2019-06-18
Fixed issue with sorting involving 0's on trait page
zsloan
2019-06-05
Fixed issue that caused interval mapping to not work because the python imple...
zsloan
2019-05-24
Replaced qtlreaper Dataset object with python object
zsloan
2019-03-18
- Added PCA traits to correlation matrix. You can't change their names yet or...
zsloan
2019-02-13
Removed pylmm references and related functions
Pjotr Prins
2019-02-05
Fixed issue with getting marker info that affected heatmap and possibly other...
zsloan
2019-01-11
Got InDel working for Variant Browser
zsloan
2018-12-21
Fixed collections so they can be very large (1000+ traits)
zsloan
2018-04-19
Changed width of top bar and a couple other html objects to 100% instead of s...
zsloan
2018-04-06
Mapping figure output now gives more accurate information
zsloan
2017-12-20
Bring in some earlier work - mostly documentation and startup handling
Pjotr Prins
2017-11-06
Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...
zsloan
2017-06-09
- Changed the way the genofile is set so different genofiles can be selected ...
zsloan
2017-04-17
Added option to remove collections from collection list page
zsloan
2017-04-05
- Temporary traits can be created, viewed, and added to collections
zsloan
2017-02-09
Fixed issue where I forgot to add GeneticType to the query_for_group query fo...
zsloan
2017-02-09
Added genetic_type to DatasetGroup object to differentiate between which grou...
zsloan
2017-02-06
Merge branch 'master' of github.com:zsloan/genenetwork2
zsloan
2017-02-06
Fixed appearance of several tables (search, mapping results, sample data)
zsloan
2017-01-26
Merge pull request #1 from genenetwork/testing
zsloan
2017-01-26
GEMMA now works with CFW data (had to update where it looks for the input fil...
zsloan
2016-12-15
Merge pull request #234 from zsloan/master
zsloan
2016-11-18
Fix sql error: (GeneNetwork error: (_mysql_exceptions.OperationalError) (1054...
Lei Yan
2016-11-02
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-11-02
Added Scroller functionality to regular (but not global) search, which increa...
zsloan
2016-10-29
For those case that we have multiple genotypes we would like to add a selector.
Lei Yan
2016-10-06
Logger: add more granular debug messages
Pjotr Prins
2016-10-05
Show datasets only on debug
Pjotr Prins
2016-09-13
Run scripts from ./wqflask - just like the webserver
Pjotr Prins
2016-09-10
Support for running maintenance scripts so they can pick up all webserver set...
Pjotr Prins
2016-07-27
Problem with phenotype traits should be fixed now
zsloan
2016-06-26
gn_server: simplify
Pjotr Prins
2016-06-26
gn_server: simplify
Pjotr Prins
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