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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
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GeneNetwork (2nd generation)
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bin
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Commit message (
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Author
2022-01-04
bin: Set GN2_PROFILE from GUIX_ENVIRONMENT.
Arun Isaac
2021-12-01
Introduce GN3_PYTHONPATH environment variable
Pjotr Prins
2021-10-28
Remove all elasticsearch references in gn2
BonfaceKilz
2021-08-06
gunicorn production settings: increase process refresh rate to clean up RAM. ...
Pjotr Prins
2020-08-20
Replace all references to python2.7 with python3.8
BonfaceKilz
2020-07-25
Updating docs and show how to include a local Python module
Pjotr Prins
2020-05-12
Remove eventlet
epysode
Pjotr Prins
2020-04-26
Merge master and testing
master
Pjotr Prins
2019-09-24
Fixed issue that caused logging in to stop working with new GUIX build
zsloan
2019-02-13
Removed pylmm references and related functions
Pjotr Prins
2018-11-20
Added option to select chromosome from trait page when mapping
zsloan
2018-10-01
- Can now remove cofactors from correlation scatterplot and select them by ju...
zsloan
2018-09-05
Production updates
GN2
2018-04-16
Docs on elasticsearch use
Pjotr Prins
2018-04-12
README and docs
Pjotr Prins
2018-04-04
ES: doc
Pjotr Prins
2018-04-02
Testing moved to Python
Pjotr Prins
2018-03-26
- Disabled PYTHONPATH injection - fix Guix instead, see https://github.com/pj...
Pjotr Prins
2018-03-26
Requests added
Pjotr Prins
2018-03-26
Fixing authentication stuff so it uses parameters properly. Also no PYTHONPAT...
Pjotr Prins
2018-03-26
Fix conflict
Pjotr Prins
2018-03-26
Add elasticsearch module to the path
Muriithi Frederick Muriuki
2018-02-11
Added gunicorn pid so we can not run twice
Pjotr Prins
2018-02-11
Using eventlet workers
zsloan
2018-02-10
Fix env variable $GEMMA_WRAPPER_COMMAND
Pjotr Prins
2018-02-10
Fixing GEMMA LOCO
Pjotr Prins
2018-02-10
Check for bimbam path and bail out if it is missing
Pjotr Prins
2018-01-31
Startup: longer timeout for gunicorn-dev mode
Pjotr Prins
2018-01-31
Startup: added -cli option
Pjotr Prins
2018-01-30
gunicorn dev and prod modes added
Pjotr Prins
2018-01-29
Fixed gunicorn example
Pjotr Prins
2018-01-29
Gunicorn works
Pjotr Prins
2018-01-29
startup script: adapting for gunicorn
Pjotr Prins
2018-01-29
Added checks in startup script, removed r-auwerx path
Pjotr Prins
2017-12-20
Bring in some earlier work - mostly documentation and startup handling
Pjotr Prins
2017-09-14
./bin/genenetwork2: add GEM_PATH for gemma-wrapper
Pjotr Prins
2017-09-04
gemma-wrapper: find binary in profile
Pjotr Prins
2017-06-02
settings: GENENETWORK_FILES
Pjotr Prins
2017-05-31
JS module handling
Pjotr Prins
2017-05-21
Merge from the diet branch.
Pjotr Prins
2016-10-09
Tests: change options
Pjotr Prins
2016-10-09
Add version information
Pjotr Prins
2016-10-07
Saner handling of TMPDIR and TEMPDIR
Pjotr Prins
2016-10-07
Startup script: add profile to the PATH and set LC_ALL to default to C (shoul...
Pjotr Prins
2016-10-05
Testing: show --all option
Pjotr Prins
2016-10-03
Use of GN2_PROFILE
Pjotr Prins
2016-10-03
Config: supporting JSON OVERRIDES
Pjotr Prins
2016-10-03
Handle JSON override files in startup script
Pjotr Prins
2016-09-26
Test: --all switch added
Pjotr Prins
2016-09-26
Mechanical Rob: make it possible to run single tests
Pjotr Prins
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