Age | Commit message (Collapse) | Author | |
---|---|---|---|
2022-07-27 | Fix one target_cols variable I forgot to switch to camelCase | zsloan | |
2022-07-27 | Convert phenotype global search to use create_datatable.js | zsloan | |
2022-07-27 | Convert gene global search to use create_datatable.js | zsloan | |
2022-07-27 | Convert Correlation table to use create_datatable.js | zsloan | |
2022-07-27 | Add table redraw function to create_datatable.js since it applies to ↵ | zsloan | |
multiple tables | |||
2022-07-27 | Change threshold for using scroller on View Collection page | zsloan | |
2022-07-27 | Set default value for tableId parameter in creatae_table, since most tables ↵ | zsloan | |
will have this ID | |||
2022-07-27 | Use create_datatable.js for the Collection List table | zsloan | |
2022-07-27 | Allow create_table to handle tables without row data provided as JSON (so it ↵ | zsloan | |
can also convert regular HTML tables drawn in the template | |||
2022-07-27 | Disable PCA when fewer than 3 traits | zsloan | |
2022-07-27 | Change some text/formatting on Correlation Matrix page | zsloan | |
2022-07-27 | Change capitalization on index page | zsloan | |
2022-07-27 | Change some text/formatting for the Scree Plot | zsloan | |
2022-07-27 | Change search result text/formatting | zsloan | |
2022-07-27 | Change formatting for search term + add line break in description text | zsloan | |
2022-07-25 | new file module for preprocessing input | Alexander_Kabui | |
2022-07-25 | add test route | Alexander_Kabui | |
2022-07-25 | enable test route | Alexander_Kabui | |
2022-07-25 | Fix BNW link | zsloan | |
2022-07-25 | Remove Comparison Bar Chart button | zsloan | |
2022-07-25 | Change Interval Analyst genome browser link to use mm10 instead of mm9 | zsloan | |
2022-07-25 | Return config in app.config or None | Frederick Muriuki Muriithi | |
Update the code to return the setting already set up in the app.config dictionary if it exists or None if it does not exist. | |||
2022-07-20 | Add marker hmac to mapping result markers so it can be directly passed to ↵ | zsloan | |
the table | |||
2022-07-20 | Add drawCallback for highlighting selected rows to default tableSettings | zsloan | |
2022-07-20 | Change mapping results table (minus Interval Analyst) to use new ↵ | zsloan | |
create_datatable.js code and load table from JSON row data | |||
2022-07-19 | Change search_result_page.html to generate its table with create_datatable.js | zsloan | |
2022-07-19 | Fix issue where customSettings weren't being passed when manually adjusting ↵ | zsloan | |
column widths | |||
2022-07-19 | Added createdRow callback function to custom table settings for View | zsloan | |
Collection page Also set a default table width of 2000px | |||
2022-07-19 | Change JS variables to camelCase and assign ID to table container div | zsloan | |
2022-07-14 | Remove column toggle JS from show_trait.html since it's in ↵ | zsloan | |
initialize_show_trait_tables.js | |||
2022-07-14 | Call DataTable() on the table id instead of referring to the_table; not | zsloan | |
sure why this is necessary, but the search doesn't work otherwise | |||
2022-07-12 | Include genotypes for F1s/reference/non-reference strains when fetching | zsloan | |
sample data for genotype traits | |||
2022-07-11 | Increase min-width for div containing tool buttons on search page | zsloan | |
2022-07-08 | Add python for exporting case attributes | zsloan | |
2022-07-08 | Add JS for exporting case attributes (sample metadata) | zsloan | |
2022-07-04 | wqflask: Remove DebugToolbarExtension | BonfaceKilz | |
This functionality, at least how we use it, is already provided natively in python's pdb. Should someone need this, they can add it manually. * wqflask/runserver.py (app_config): Remove "flask_debugtoolbar" import and instantiation. * wqflask/utility/startup_config.py (app_config): Ditto. | |||
2022-07-04 | wqflask: use the raw user string if value is non-existent in redis | BonfaceKilz | |
* wqflask/wqflask/metadata_edits.py (_get_diffs): If a user---whose value is extracted from Redis and encoded in the file name---doesn't exist in Redis, use the raw string extracted from the file. | |||
2022-07-04 | wqflask: Use a map over a tuple when fetching case-attributes | BonfaceKilz | |
* wqflask/wqflask/metadata_edits.py (update_phenotype): Replace old "get_case_attributes" function call which returned a dict with the new updated version that returns a tuple. | |||
2022-06-23 | Fix manual column width change feature to work in create_datatable.js | zsloan | |
2022-06-23 | Add columnDefs as parameter for setUserColumnDefWidths | zsloan | |
Now that the function is in a separate JS file it needs the parameter to be directly provided | |||
2022-06-23 | Fix JS/CSS imports and include scroller setting in custom table settings | zsloan | |
2022-06-23 | Change some variables in search_result_page.html to camelCase | zsloan | |
2022-06-23 | Remove HTML table from collections/view.html and replace with list of | zsloan | |
column definitions passed to create_datatable.js | |||
2022-06-23 | Change tableSettings in loadDataTable parameters to customSettings | zsloan | |
2022-06-23 | Change jsonable in GeneralTrait so that it passes all necessary table | zsloan | |
information | |||
2022-06-23 | Convert trait.view to string for conversion to JSON | zsloan | |
It's originally a boolean, which causes an error when passed to the JS code as JSON | |||
2022-06-23 | Change create_datatable.js from CRLF to LF + fix a couple syntax bugs | zsloan | |
2022-06-23 | Pass table data to collections/view template and create_table.js | zsloan | |
2022-06-21 | wqflask: views: Delete noisy logging and dead code | BonfaceKilz | |
- Remove commented out code-blocks - Remove calls with this pattern: logger.info("Sending ...") logger.info(request.url) Should you want to inspect the local context of an environment when troubleshooting, set a breakpoint() and inspect the environment. To view everything in the local context, use "pp locals()"; and to view everything in the global context, use "pp globals()". | |||
2022-06-20 | Simplify partial correlation method choices | Frederick Muriuki Muriithi | |
- Have only `Pearson's r` and `Spearman's rho` as the available choices for the partial correlations. |