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| author | BonfaceKilz | 2022-07-04 15:10:14 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2022-07-04 15:37:52 +0300 |
| commit | c1c5ab5ba940e2b48c9568a6c1d34ccae4d17d7a (patch) | |
| tree | dcfabefaa15c98949a3d2bcaed5e88da3eabff4e | |
| parent | c6d6b1b59531d44b514f97184160d4bb096b01b5 (diff) | |
| download | genenetwork2-c1c5ab5ba940e2b48c9568a6c1d34ccae4d17d7a.tar.gz | |
wqflask: Use a map over a tuple when fetching case-attributes
* wqflask/wqflask/metadata_edits.py (update_phenotype): Replace old
"get_case_attributes" function call which returned a dict with the new
updated version that returns a tuple.
| -rw-r--r-- | wqflask/wqflask/metadata_edits.py | 3 |
1 files changed, 1 insertions, 2 deletions
diff --git a/wqflask/wqflask/metadata_edits.py b/wqflask/wqflask/metadata_edits.py index 5a5ee4ac..5468fe9b 100644 --- a/wqflask/wqflask/metadata_edits.py +++ b/wqflask/wqflask/metadata_edits.py @@ -227,8 +227,7 @@ def update_phenotype(dataset_id: str, name: str): diff_data = {} with database_connection() as conn: headers = ["Strain Name", "Value", "SE", "Count"] + list( - get_case_attributes(conn).keys() - ) + map(lambda x: x[1], get_case_attributes(conn))) diff_data = remove_insignificant_edits( diff_data=csv_diff( base_csv=( |