genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Collapse)	Author
2022-07-28	Use external process to compute sample correlations	Frederick Muriuki Muriithi

2022-07-27	From console log from plotly_probability_plot.js	zsloan

2022-07-27	Change most variables in show_trait.js to camelCase	zsloan

2022-07-27	Define drawCallback in trait page tableSettings, since this table shouldn't ↵	zsloan
	call change_buttons
2022-07-27	Use create_datatable.js to create trait page sample data tables + change ↵	zsloan
	most variables to camelCase
2022-07-27	Add necessary new JS files to show_trait.html and make formatting of all js ↵	zsloan
	imports the same
2022-07-27	Fix one target_cols variable I forgot to switch to camelCase	zsloan

2022-07-27	Convert phenotype global search to use create_datatable.js	zsloan

2022-07-27	Convert gene global search to use create_datatable.js	zsloan

2022-07-27	Convert Correlation table to use create_datatable.js	zsloan

2022-07-27	Add table redraw function to create_datatable.js since it applies to ↵	zsloan
	multiple tables
2022-07-27	Change threshold for using scroller on View Collection page	zsloan

2022-07-27	Set default value for tableId parameter in creatae_table, since most tables ↵	zsloan
	will have this ID
2022-07-27	Use create_datatable.js for the Collection List table	zsloan

2022-07-27	Allow create_table to handle tables without row data provided as JSON (so it ↵	zsloan
	can also convert regular HTML tables drawn in the template
2022-07-27	Disable PCA when fewer than 3 traits	zsloan

2022-07-27	Change some text/formatting on Correlation Matrix page	zsloan

2022-07-27	Change capitalization on index page	zsloan

2022-07-27	Change some text/formatting for the Scree Plot	zsloan

2022-07-27	Change search result text/formatting	zsloan

2022-07-27	Change formatting for search term + add line break in description text	zsloan

2022-07-25	new file module for preprocessing input	Alexander_Kabui

2022-07-25	add test route	Alexander_Kabui

2022-07-25	enable test route	Alexander_Kabui

2022-07-25	Fix BNW link	zsloan

2022-07-25	Remove Comparison Bar Chart button	zsloan

2022-07-25	Change Interval Analyst genome browser link to use mm10 instead of mm9	zsloan

2022-07-25	Return config in app.config or None	Frederick Muriuki Muriithi
	Update the code to return the setting already set up in the app.config dictionary if it exists or None if it does not exist.
2022-07-20	Add marker hmac to mapping result markers so it can be directly passed to ↵	zsloan
	the table
2022-07-20	Add drawCallback for highlighting selected rows to default tableSettings	zsloan

2022-07-20	Change mapping results table (minus Interval Analyst) to use new ↵	zsloan
	create_datatable.js code and load table from JSON row data
2022-07-19	Change search_result_page.html to generate its table with create_datatable.js	zsloan

2022-07-19	Fix issue where customSettings weren't being passed when manually adjusting ↵	zsloan
	column widths
2022-07-19	Added createdRow callback function to custom table settings for View	zsloan
	Collection page Also set a default table width of 2000px
2022-07-19	Change JS variables to camelCase and assign ID to table container div	zsloan

2022-07-14	Remove column toggle JS from show_trait.html since it's in ↵	zsloan
	initialize_show_trait_tables.js
2022-07-14	Call DataTable() on the table id instead of referring to the_table; not	zsloan
	sure why this is necessary, but the search doesn't work otherwise
2022-07-12	Include genotypes for F1s/reference/non-reference strains when fetching	zsloan
	sample data for genotype traits
2022-07-11	Increase min-width for div containing tool buttons on search page	zsloan

2022-07-08	Add python for exporting case attributes	zsloan

2022-07-08	Add JS for exporting case attributes (sample metadata)	zsloan

2022-07-04	wqflask: Remove DebugToolbarExtension	BonfaceKilz
	This functionality, at least how we use it, is already provided natively in python's pdb. Should someone need this, they can add it manually. * wqflask/runserver.py (app_config): Remove "flask_debugtoolbar" import and instantiation. * wqflask/utility/startup_config.py (app_config): Ditto.
2022-07-04	wqflask: use the raw user string if value is non-existent in redis	BonfaceKilz
	* wqflask/wqflask/metadata_edits.py (_get_diffs): If a user---whose value is extracted from Redis and encoded in the file name---doesn't exist in Redis, use the raw string extracted from the file.
2022-07-04	wqflask: Use a map over a tuple when fetching case-attributes	BonfaceKilz
	* wqflask/wqflask/metadata_edits.py (update_phenotype): Replace old "get_case_attributes" function call which returned a dict with the new updated version that returns a tuple.
2022-06-23	Fix manual column width change feature to work in create_datatable.js	zsloan

2022-06-23	Add columnDefs as parameter for setUserColumnDefWidths	zsloan
	Now that the function is in a separate JS file it needs the parameter to be directly provided
2022-06-23	Fix JS/CSS imports and include scroller setting in custom table settings	zsloan

2022-06-23	Change some variables in search_result_page.html to camelCase	zsloan

2022-06-23	Remove HTML table from collections/view.html and replace with list of	zsloan
	column definitions passed to create_datatable.js
2022-06-23	Change tableSettings in loadDataTable parameters to customSettings	zsloan