diff options
Diffstat (limited to 'wqflask')
| -rwxr-xr-x | wqflask/wqflask/templates/index_page_orig.html | 10 | ||||
| -rw-r--r-- | wqflask/wqflask/templates/show_trait_details.html | 12 |
2 files changed, 11 insertions, 11 deletions
diff --git a/wqflask/wqflask/templates/index_page_orig.html b/wqflask/wqflask/templates/index_page_orig.html index 6f21af56..7b2a2c0f 100755 --- a/wqflask/wqflask/templates/index_page_orig.html +++ b/wqflask/wqflask/templates/index_page_orig.html @@ -168,7 +168,7 @@ <li><b>RIF=mitochondrial</b> searches RNA databases for <a href="https://en.wikipedia.org/wiki/GeneRIF"> GeneRIF</a> links.</li> - <li><b>WIKI=nicotine</b> searches <a href="http://www.genenetwork.org/webqtl/main.py?FormID=geneWiki"> + <li><b>WIKI=nicotine</b> searches <a href="http://gn1.genenetwork.org/webqtl/main.py?FormID=geneWiki"> GeneWiki</a> for genes that you or other users have annotated with the word <i>nicotine</i>.</li> @@ -177,7 +177,7 @@ Gene Ontology</a>.</li> <li><b>RIF=diabetes LRS=(9 999 Chr2 100 105) transLRS=(9 999 10)</b> - finds diabetes-associated transcripts with peak <a href="http://www.genenetwork.org/glossary.html#E"> + finds diabetes-associated transcripts with peak <a href="http://gn1.genenetwork.org/glossary.html#E"> trans eQTLs</a> on Chr 2 between 100 and 105 Mb with LRS scores between 9 and 999.</li> </ul> @@ -189,7 +189,7 @@ <div class="page-header"> <h1>Affiliates</h1> <ul> - <li><b><a href="http://genenetwork.org">GeneNetwork 1</a> at UTHSC</b></li> + <li><b><a href="http://gn1.genenetwork.org">GeneNetwork 1</a> at UTHSC</b></li> <li><a href="http://ucscbrowser.genenetwork.org/">Genome Browser</a> at UTHSC</li> <li><a href="https://systems-genetics.org/">Systems Genetics</a> at EPFL</li> <li><a href="http://bnw.genenetwork.org/">Bayesian Network Web Server</a> at UTHSC</li> @@ -259,7 +259,7 @@ </ul> <h3>GeneNetwork v1:</h3> <ul> - <li><a href="http://www.genenetwork.org/">Main website</a> at UTHSC</li> + <li><a href="http://gn1.genenetwork.org/">Main website</a> at UTHSC</li> <li><a href="http://artemis.uthsc.edu/">Time Machine</a>: Full GN versions from 2009 to 2016 (mm9)</li> Cloud (EC2)</a></li> </ul> @@ -299,7 +299,7 @@ <h3>User Guide</h3> <h5>Read the - <a href="http://www.genenetwork.org/index4.html"> + <a href="http://gn1.genenetwork.org/index4.html"> user guide</a>.</h5> </section>--> diff --git a/wqflask/wqflask/templates/show_trait_details.html b/wqflask/wqflask/templates/show_trait_details.html index b64b34d7..3584be22 100644 --- a/wqflask/wqflask/templates/show_trait_details.html +++ b/wqflask/wqflask/templates/show_trait_details.html @@ -53,7 +53,7 @@ <tr> <td><b>Database</b></td> <td> - <a href="http://genenetwork.org/webqtl/main.py?FormID=sharinginfo&InfoPageName={{ dataset.name }}" target="_blank"> + <a href="http://gn1.genenetwork.org/webqtl/main.py?FormID=sharinginfo&InfoPageName={{ dataset.name }}" target="_blank"> {{ dataset.fullname }} </a> </td> @@ -62,7 +62,7 @@ <tr> <td><b>Target Score</b></td> <td> - <a href="http://genenetwork.org/blatInfo.html" target="_blank" title="Values higher than 2 for the specificity are good"> + <a href="http://gn1.genenetwork.org/blatInfo.html" target="_blank" title="Values higher than 2 for the specificity are good"> BLAT Specificity </a>: {{ "%0.3f" | format(this_trait.probe_set_specificity|float) }} @@ -208,7 +208,7 @@ </a> {% if this_trait.dataset.type == 'ProbeSet' %} {% if this_trait.symbol != None %} - <a target="_blank" href="http://www.genenetwork.org/webqtl/main.py?cmd=sch&gene={{ this_trait.symbol }}&alias=1&species={{ dataset.group.species }}"> + <a target="_blank" href="http://gn1.genenetwork.org/webqtl/main.py?cmd=sch&gene={{ this_trait.symbol }}&alias=1&species={{ dataset.group.species }}"> <button type="button" class="btn btn-default" title="Find similar expression data">Find</button> </a> {% endif %} @@ -218,7 +218,7 @@ </a> {% endif %} {% if this_trait.symbol != None %} - <a target="_blank" href="http://genenetwork.org/webqtl/main.py?FormID=geneWiki&symbol={{ this_trait.symbol }}"> + <a target="_blank" href="http://gn1.genenetwork.org/webqtl/main.py?FormID=geneWiki&symbol={{ this_trait.symbol }}"> <button type="button" class="btn btn-default" title="Write or review comments about this gene">GeneWiki</button> </a> {% if dataset.group.species == "mouse" or dataset.group.species == "rat" %} @@ -228,12 +228,12 @@ {% endif %} {% endif %} {% if show_probes == "True" %} - <a target="_blank" href="http://genenetwork.org/webqtl/main.py?FormID=showProbeInfo&database={{ this_trait.dataset.name }}&ProbeSetID={{ this_trait.name }}&CellID={{ this_trait.cellid }}&RISet={{ dataset.group.name }}&incparentsf1=ON"> + <a target="_blank" href="http://gn1.genenetwork.org/webqtl/main.py?FormID=showProbeInfo&database={{ this_trait.dataset.name }}&ProbeSetID={{ this_trait.name }}&CellID={{ this_trait.cellid }}&RISet={{ dataset.group.name }}&incparentsf1=ON"> <button type="button" class="btn btn-default" title="Check sequence of probes">Probes</button> </a> {% endif %} {% endif %} - <a target="_blank" href="http://www.genenetwork.org/webqtl/main.py?cmd=show&db={{ this_trait.dataset.name }}&probeset={{ this_trait.name }}"> + <a target="_blank" href="http://gn1.genenetwork.org/webqtl/main.py?cmd=show&db={{ this_trait.dataset.name }}&probeset={{ this_trait.name }}"> <button type="button" id="view_in_gn1" class="btn btn-primary" title="View Trait in GN1">View in GN1</button> </a> </div> |