diff options
Diffstat (limited to 'wqflask/wqflask/templates/marker_regression_gn1.html')
| -rw-r--r-- | wqflask/wqflask/templates/marker_regression_gn1.html | 22 |
1 files changed, 12 insertions, 10 deletions
diff --git a/wqflask/wqflask/templates/marker_regression_gn1.html b/wqflask/wqflask/templates/marker_regression_gn1.html index d13c68cd..08a934a6 100644 --- a/wqflask/wqflask/templates/marker_regression_gn1.html +++ b/wqflask/wqflask/templates/marker_regression_gn1.html @@ -15,6 +15,7 @@ <input type="hidden" name="trait_id" value="{{ this_trait.name }}"> <input type="hidden" name="dataset" value="{{ dataset.name }}"> <input type="hidden" name="genofile" value="{{ genofile_string }}"> + <input type="hidden" name="geno_db_exists" value="{{ geno_db_exists }}"> <input type="hidden" name="results_path" value="{{ mapping_results_path }}"> <input type="hidden" name="method" value="{{ mapping_method }}"> {% for sample in samples %} @@ -154,7 +155,7 @@ <div class="tab-pane active" id="gn1_map"> <div class="qtlcharts"> {{ gifmap|safe }} - <img src="/generated/{{ filename }}.jpeg" usemap="#WebQTLImageMap"> + <img src="/generated/{{ filename }}.png" usemap="#WebQTLImageMap"> {% if additiveChecked|upper == "ON" %} <br> <span style="white-space: nowrap;">A positive additive coefficient (green line) indicates that {{ dataset.group.parlist[1] }} alleles increase trait values. In contrast, a negative additive coefficient (orange line) indicates that {{ dataset.group.parlist[0] }} alleles increase trait values.</span> @@ -180,10 +181,10 @@ </form> {% if selectedChr == -1 %} - <div style="width:{% if 'additive' in trimmed_markers[0] %}45%{% else %}35%{% endif %};"> - <h2>Results</h2> - <div id="table_container"> - <table id="qtl_results" class="table table-hover table-striped nowrap"> + <div class="container" style="padding-left: 30px; width:{% if 'additive' in trimmed_markers[0] %}45%{% else %}35%{% endif %};"> + <h2>Mapping Statistics</h2> + <div id="table_container" style="border-style: solid; border-width: 1px; border-color: black;"> + <table id="trait_table" class="table table-hover table-striped nowrap"> <thead> <tr> <th></th> @@ -194,7 +195,7 @@ {% if plotScale != "physic" %} <th>cM</th> {% else %} - <th>Mb</th> + <th align="right">Mb</th> {% endif %} {% if 'additive' in trimmed_markers[0] %} <th>Add Eff</th> @@ -209,11 +210,11 @@ <tr> <td align="center" style="padding-right: 0px;"> <input type="checkbox" name="selectCheck" - class="checkbox edit_sample_checkbox" - value="{{ marker.name }}" checked="checked"> + class="checkbox trait_checkbox" + value="{{ marker.name }}"> </td> <td align="right">{{ loop.index }}</td> - <td>{{ marker.name }}</td> + <td>{% if geno_db_exists == "True" %}<a href="/show_trait?trait_id={{ marker.name }}&dataset={{ dataset.group.name }}Geno">{{ marker.name }}</a>{% else %}{{ marker.name }}{% endif %}</td> {% if LRS_LOD == "LOD" or LRS_LOD == "-log(p)" %} {% if 'lod_score' in marker %} <td align="right">{{ '%0.2f' | format(marker.lod_score|float) }}</td> @@ -294,6 +295,7 @@ </script> {% endif %} + <script language="javascript" type="text/javascript" src="/static/new/javascript/search_results.js"></script> {% if mapping_method != "gemma" and mapping_method != "plink" %} <script language="javascript" type="text/javascript" src="/static/new/javascript/panelutil.js"></script> <script language="javascript" type="text/javascript" src="/static/new/javascript/chr_lod_chart.js"></script> @@ -304,7 +306,7 @@ <script type="text/javascript" charset="utf-8"> $(document).ready( function () { console.time("Creating table"); - $('#qtl_results').DataTable( { + $('#trait_table').DataTable( { {% if mapping_method != "reaper" %} "columns": [ { "type": "natural", "width": "5%" }, |