diff options
Diffstat (limited to 'wqflask/wqflask/static/new/javascript/get_traits_from_collection.coffee')
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/get_traits_from_collection.coffee | 228 |
1 files changed, 0 insertions, 228 deletions
diff --git a/wqflask/wqflask/static/new/javascript/get_traits_from_collection.coffee b/wqflask/wqflask/static/new/javascript/get_traits_from_collection.coffee deleted file mode 100644 index 07be824f..00000000 --- a/wqflask/wqflask/static/new/javascript/get_traits_from_collection.coffee +++ /dev/null @@ -1,228 +0,0 @@ -console.log("before get_traits_from_collection") - -# Going to be used to hold collection list -# So we can repopulate it when the back button is clicked -collection_list = null -this_trait_data = null - -selected_traits = {} - -collection_click = () -> - console.log("Clicking on:", $(this)) - this_collection_url = $(this).find('.collection_name').prop("href") - this_collection_url += "&json" - console.log("this_collection_url", this_collection_url) - collection_list = $("#collections_holder").html() - $.ajax( - dataType: "json", - url: this_collection_url, - success: process_traits - ) - -submit_click = () -> - - selected_traits = {} - - traits = [] - $('#collections_holder').find('input[type=checkbox]:checked').each -> - this_trait = $(@).parents('tr').find('.trait').text() - console.log("this_trait is:", this_trait) - this_dataset = $(@).parents('tr').find('.dataset').text() - console.log("this_dataset is:", this_dataset) - this_trait_url = "/trait/get_sample_data?trait="+this_trait+"&dataset="+this_dataset - $.ajax( - dataType: "json", - url: this_trait_url, - async: false, - success: add_trait_data - ) - - console.log("SELECTED_TRAITS IS:", selected_traits) - - trait_names = [] - samples = $('input[name=allsamples]').val().split(" ") - all_vals = [] - - this_trait_vals = get_this_trait_vals(samples) - all_vals.push(this_trait_vals) - - for trait in Object.keys(selected_traits) - trait_names.push(trait) - - this_trait_vals = [] - for sample in samples - if sample in Object.keys(selected_traits[trait]) - this_trait_vals.push(parseFloat(selected_traits[trait][sample])) - else - this_trait_vals.push(null) - all_vals.push(this_trait_vals) - - trait_vals_csv = create_trait_data_csv(selected_traits) - scatter_matrix = new ScatterMatrix(trait_vals_csv) - scatter_matrix.render() - - - #create_scatterplots(trait_names, samples, all_vals) - - $.colorbox.close() - -create_trait_data_csv = (selected_traits) -> - trait_names = [] - trait_names.push($('input[name=trait_id]').val()) - samples = $('input[name=allsamples]').val().split(" ") - all_vals = [] - this_trait_vals = get_this_trait_vals(samples) - all_vals.push(this_trait_vals) - - for trait in Object.keys(selected_traits) - trait_names.push(trait) - - this_trait_vals = [] - for sample in samples - if sample in Object.keys(selected_traits[trait]) - this_trait_vals.push(parseFloat(selected_traits[trait][sample])) - else - this_trait_vals.push(null) - all_vals.push(this_trait_vals) - - console.log("all_vals:", all_vals) - - trait_vals_csv = trait_names.join(",") - trait_vals_csv += "\n" - - for sample, index in samples - if all_vals[0][index] == null - continue - sample_vals = [] - for trait in all_vals - sample_vals.push(trait[index]) - trait_vals_csv += sample_vals.join(",") - trait_vals_csv += "\n" - - #console.log("trait_vals_csv:", trait_vals_csv) - - return trait_vals_csv - -trait_click = () -> - console.log("Clicking on:", $(this)) - trait = $(this).parent().find('.trait').text() - dataset = $(this).parent().find('.dataset').text() - this_trait_url = "/trait/get_sample_data?trait="+trait+"&dataset="+dataset - console.log("this_trait_url", this_trait_url) - $.ajax( - dataType: "json", - url: this_trait_url, - success: get_trait_data - ) - $.colorbox.close() - -add_trait_data = (trait_data, textStatus, jqXHR) -> - trait_name = trait_data[0] - trait_sample_data = trait_data[1] - selected_traits[trait_name] = trait_sample_data - console.log("selected_traits:", selected_traits) - -get_trait_data = (trait_data, textStatus, jqXHR) -> - #trait_list = $('input[name=compare_traits]') - #console.log("trait_list:", trait_list.val()) - console.log("trait:", trait_data[0]) - trait_sample_data = trait_data[1] - console.log("trait_sample_data:", trait_sample_data) - samples = $('input[name=allsamples]').val().split(" ") - vals = [] - - for sample in samples - if sample in Object.keys(trait_sample_data) - vals.push(parseFloat(trait_sample_data[sample])) - else - vals.push(null) - - #console.log("sorted_samples:", samples) - #console.log("sorted_vals:", vals) - - if $('input[name=samples]').length < 1 - $('#hidden_inputs').append('<input type="hidden" name="samples" value="[' + samples.toString() + ']" />') - $('#hidden_inputs').append('<input type="hidden" name="vals" value="[' + vals.toString() + ']" />') - - this_trait_vals = get_this_trait_vals(samples) - - #json_data = assemble_into_json(this_trait_vals_json) - - #console.log("json_data[1]:", json_data[1]) - - console.log("THE LENGTH IS:", $('input[name=vals]').length) - #if $('input[name=vals]').length == 1 - # create_scatterplot(samples, [this_trait_vals, vals]) - - color_by_trait(trait_sample_data) - -get_this_trait_vals = (samples) -> - this_trait_vals = [] - for sample in samples - this_val = parseFloat($("input[name='value:"+sample+"']").val()) - if !isNaN(this_val) - this_trait_vals.push(this_val) - else - this_trait_vals.push(null) - console.log("this_trait_vals:", this_trait_vals) - - this_vals_json = '[' + this_trait_vals.toString() + ']' - - return this_trait_vals - -assemble_into_json = (this_trait_vals) -> - num_traits = $('input[name=vals]').length - samples = $('input[name=samples]').val() - json_ids = samples - - json_data = '[' + this_trait_vals - - $('input[name=vals]').each (index, element) => - json_data += ',' + $(element).val() - json_data += ']' - - return [json_ids, json_data] - -color_by_trait = (trait_sample_data, textStatus, jqXHR) -> - #trait_sample_data = trait_sample_data - console.log('in color_by_trait:', trait_sample_data) - root.bar_chart.color_by_trait(trait_sample_data) - -process_traits = (trait_data, textStatus, jqXHR) -> - console.log('in process_traits with trait_data:', trait_data) - - the_html = "<button id='back_to_collections' class='btn btn-inverse btn-small'>" - the_html += "<i class='icon-white icon-arrow-left'></i> Back </button>" - the_html += " <button id='submit' class='btn btn-primary btn-small'> Submit </button>" - - the_html += "<table class='table table-hover'>" - the_html += "<thead><tr><th></th><th>Record</th><th>Data Set</th><th>Description</th><th>Mean</th></tr></thead>" - the_html += "<tbody>" - for trait in trait_data - the_html += "<tr class='trait_line'>" - the_html += "<td class='select_trait'><input type='checkbox' name='selectCheck' class='checkbox edit_sample_checkbox'></td>" - the_html += "<td class='trait'>#{ trait.name }</td>" - the_html += "<td class='dataset'>#{ trait.dataset }</td>" - the_html += "<td>#{ trait.description }</td>" - the_html += "<td>#{ trait.mean or ' ' }</td></tr>" - the_html += "</tbody>" - the_html += "</table>" - - $("#collections_holder").html(the_html) - $('#collections_holder').colorbox.resize() - -back_to_collections = () -> - console.log("collection_list:", collection_list) - $("#collections_holder").html(collection_list) - - $(document).on("click", ".collection_line", collection_click) - $('#collections_holder').colorbox.resize() - -$ -> - console.log("inside get_traits_from_collection") - - $(document).on("click", ".collection_line", collection_click) - $(document).on("click", "#submit", submit_click) - $(document).on("click", ".trait", trait_click) - $(document).on("click", "#back_to_collections", back_to_collections) - |