1 files changed, 0 insertions, 80 deletions
diff --git a/wqflask/tests/unit/base/test_species.py b/wqflask/tests/unit/base/test_species.py
deleted file mode 100644
index f12bde6d..00000000
--- a/wqflask/tests/unit/base/test_species.py
+++ /dev/null
@@ -1,80 +0,0 @@
-"""Tests wqflask/base/species.py"""
-import pytest
-from base.species import TheSpecies
-from base.species import IndChromosome
-from base.species import Chromosomes
-from collections import OrderedDict
-from dataclasses import dataclass
-
-
-@dataclass
-class MockChromosome:
-    OrderId: int
-    Name: str
-    Length: int
-
-
-@dataclass
-class MockGroup:
-    name: str
-
-
-@dataclass
-class MockDataset:
-    group: MockGroup
-
-
-@pytest.mark.parametrize(
-    ("species_name", "dataset", "expected_name", "chromosome_param"),
-    (("BXD", None, "BXD", 1),
-     (None, "Random Dataset", None, 1)))
-def test_species(mocker, species_name, dataset,
-                 expected_name, chromosome_param):
-    _c = mocker.patch("base.species.Chromosomes",
-                      return_value=chromosome_param)
-    test_species = TheSpecies(dataset=dataset,
-                              species_name=species_name)
-    _c.assert_called_with(species=species_name,
-                          dataset=dataset)
-    assert test_species.name == expected_name
-    assert test_species.chromosomes == chromosome_param
-
-
-@pytest.mark.parametrize(
-    ("name", "length", "mb_length"),
-    (("Test A", 10000000, 10),
-     ("Test B", 100, 0.0001)))
-def test_create_ind_chromosome(name, length, mb_length):
-    _ind = IndChromosome(name=name, length=length)
-    assert _ind.name == name
-    assert _ind.length == length
-    assert _ind.mb_length == mb_length
-
-
-@pytest.mark.parametrize(
-    ("species", "dataset", "expected_call"),
-    (("bxd", MockDataset(MockGroup("Random")),
-      ("SELECT Chr_Length.Name, Chr_Length.OrderId, Length "
-       "FROM Chr_Length, Species WHERE "
-       "Chr_Length.SpeciesId = Species.SpeciesId AND "
-       "Species.Name = %s "
-       "ORDER BY OrderId", ("Bxd",))),
-     (None, MockDataset(MockGroup("Random")),
-      ("SELECT Chr_Length.Name, Chr_Length.OrderId, "
-       "Length FROM Chr_Length, InbredSet WHERE "
-       "Chr_Length.SpeciesId = InbredSet.SpeciesId AND "
-       "InbredSet.Name = "
-       "%s ORDER BY OrderId", ("Random",)))))
-def test_create_chromosomes(mocker, species, dataset, expected_call):
-    mock_conn = mocker.MagicMock()
-    with mock_conn.cursor() as cursor:
-        cursor.fetchall.return_value = (("1", 2, 10,),
-                                        ("2", 3, 11,),
-                                        ("4", 5, 15,),)
-        _c = Chromosomes(dataset=dataset, species=species)
-        assert _c.chromosomes(cursor) == OrderedDict([
-            ("1", IndChromosome("1", 10)),
-            ("2", IndChromosome("2", 11)),
-            ("4", IndChromosome("4", 15)),
-        ])
-        cursor.execute.assert_called_with(*expected_call)