diff options
Diffstat (limited to 'web/genotypes/AXBXA.geno')
| -rwxr-xr-x | web/genotypes/AXBXA.geno | 2460 |
1 files changed, 2460 insertions, 0 deletions
diff --git a/web/genotypes/AXBXA.geno b/web/genotypes/AXBXA.geno new file mode 100755 index 00000000..14116ef3 --- /dev/null +++ b/web/genotypes/AXBXA.geno @@ -0,0 +1,2460 @@ +#this is AXBXA genotype file, it should be tab-delimited
+#the first three/four columns should be "Chr, Locus, cM, [Mb]" (case sensitive)
+#please save as Unix format text file.
+#comment line always start with a '#'
+#type riset or intercross
+@type:riset
+@name:AXBXA
+#abbreviation of maternal or paternal parents
+@mat:B
+@pat:A
+#heterozygous , optional, default is "H"
+@het:H
+#Unknown , optional, default is "U"
+@unk:U
+Chr Locus cM Mb AXB1 AXB2 AXB3 AXB4 AXB5 AXB6 AXB7 AXB8 AXB9 AXB10 AXB11 AXB12 AXB13/14 AXB15 AXB17 AXB18/19/20 AXB21 AXB23 AXB24 BXA1 BXA2 BXA4 BXA7 BXA8/17 BXA11 BXA12 BXA13 BXA14 BXA16 BXA18 BXA20 BXA22 BXA23 BXA24 BXA25 BXA26
+1 rs13475701 0 4.516168 A B A A B B A B A A A B B B B A B A A A A A A A B A A A A B A A A A B A
+1 rs3698285 0 10.019111 A B A A B B A B A A A B B B B A B A A A A A A A B A A A A B A A A A B A
+1 rs3678510 0.73 10.67149 A B B A B B A B A A A B B B B A B A A A A A A A B A A A A B A A A A B A
+1 rs13475730 0.73 13.11566 A B B A B B A B A A A B B B B A B A A A A A A A B A A A A B A A A A B A
+1 rs3654377 1.46 13.21927 A B B A B B A B A A A B B B B A B A A A A A B A B A A A A B A A A A B A
+1 rs3654866 1.46 13.697098 A B B A B B A B A A A B B B B A B A A A A A B A B A A A A B A A A A B A
+1 rs3669485 2.19 13.975252 A B B A B B A B A A A B B B B A B A A A A B B A B A A A A B A A A A B A
+1 rs3723784 2.19 14.668676 A B B A B B A B A A A B B B B A B A A A A B B A B A A A A B A A A A B A
+1 rs3678179 4.629 15.498263 A B B A A B A B A A A B B B A A B A A A A B B A B A A A A B A A A B B A
+1 rs3670611 4.629 20.623897 A B B A A B A B A A A B B B A A B A A A A B B A B A A A A B A A A B B A
+1 rs6404446 5.359 20.774306 A B B A A B A B A A A B B B A A B A A A A B B A A A A A A B A A A B B A
+1 gnf01.018.340 5.359 21.444366 A B B A A B A B A A A B B B A A B A A A A B B A A A A A A B A A A B B A
+1 rs6253968 6.089 21.628544 A B B A A B A B A A A B B B A A B A B A A B B A A A A A A B A A A B B A
+1 rs3711079 6.819 21.932521 A B B A A B A B A A A B B B A A B A B A A B A A A A A A A B A A A B B A
+1 mCV23695025 8.357 22.158486 A A B A A B A B A A A B B B A A B A B A A B A A A A A A B B A A A B B A
+1 gnf01.019.189 8.357 22.307115 A A B A A B A B A A A B B B A A B A B A A B A A A A A A B B A A A B B A
+1 rs6361963 9.087 22.671897 A A B A A B A B A A A B B B A A B A B B A B A A A A A A B B A A A B B A
+1 rs13475762 9.087 22.852171 A A B A A B A B A A A B B B A A B A B B A B A A A A A A B B A A A B B A
+1 rs6316488 9.817 23.151887 A A B A A B A B A A A B B B A A B A B B A B A A A B A A B B A A A B B A
+1 mCV24784983 9.817 25.284061 A A B A A B A B A A A B B B A A B A B B A B A A A B A A B B A A A B B A
+1 D1Mit211 10.547 25.567954 A A B A A B A B A A A B B B A A B B B B A B A A A B A A B B A A A B B A
+1 rs13475772 13.997 25.632282 A A B A A B A B A A A B B B A A B B B B B B A B A B A A A B A A A B A A
+1 rs6166266 14.727 25.948724 A A B A A B A B A A A B B B A A B B B B B B A B A B A A A B A A B B A A
+1 rs3709207 14.727 26.403322 A A B A A B A B A A A B B B A A B B B B B B A B A B A A A B A A B B A A
+1 rs13475776 15.457 26.455352 A A B A A B A B A A A B B B A A B B B B B B A B A B A B A B A A B B A A
+1 rs3713281 15.457 29.009415 A A B A A B A B A A A B B B A A B B B B B B A B A B A B A B A A B B A A
+1 rs6384194 16.187 29.231425 A A B A A B A A A A A B B B A A B B B B B B A B A B A B A B A A B B A A
+1 rs4137502 16.187 30.887617 A A B A A B A A A A A B B B A A B B B B B B A B A B A B A B A A B B A A
+1 rs6329963 16.916 30.978257 A A B A A B A B A A A B B B A A B B B B B B A B A B A B A B A A B B A A
+1 CEL-1_31944599 18.455 31.714578 A A B A A B A B B A A B B B A A B B B B B B A B A B A B A B B A B B A A
+1 rs13475794 18.455 32.202096 A A B A A B A B B A A B B B A A B B B B B B A B A B A B A B B A B B A A
+1 rs6272930 20.895 32.391547 A A B A A B A B A A A A B B A A B B B B B B A B A A A B A B B A B B A A
+1 rs3657255 20.895 35.090484 A A B A A B A B A A A A B B A A B B B B B B A B A A A B A B B A B B A A
+1 rs13475806 23.334 35.444271 A A B A A B A A A A A A B B A A B B B B B B A B A A A A A B B A B B A B
+1 rs13475808 23.334 35.595389 A A B A A B A A A A A A B B A A B B B B B B A B A A A A A B B A B B A B
+1 rs3683997 24.064 35.935817 A A B A A B A A A A A A B B A A B B B B B A A B A A A A A B B A B B A B
+1 gnf01.032.979 24.064 36.250224 A A B A A B A A A A A A B B A A B B B B B A A B A A A A A B B A B B A B
+1 rs13475813 24.794 36.63538 A A B A A B A A A A A A B B A A A B B B B A A B A A A A A B B A B B A B
+1 D1Mit171 24.794 36.800666 A A B A A B A A A A A A B B A A A B B B B A A B A A A A A B B A B B A B
+1 gnf01.033.663 25.524 36.936327 A A B A A B A A A A A A B B B A A B B B B A A B A A A A A B B A B B A B
+1 rs13475816 25.524 37.614782 A A B A A B A A A A A A B B B A A B B B B A A B A A A A A B B A B B A B
+1 rs13475818 26.254 38.093584 A A B A A B A A A A A B B B B A A B B B B A A B A A A A A B B A B B A B
+1 gnf01.035.780 26.984 39.052957 A A B A A B A A A A A B B B B A A B B A B A A B A A A A A B B A B B A B
+1 rs4222297 26.254 39.05313 A A B A A B A A A A A B B B B A A B B B B A A B A A A A A B B A B B A B
+1 rs13475824 26.984 40.338943 A A B A A B A A A A A B B B B A A B B A B A A B A A A A A B B A B B A B
+1 rs3677272 28.522 40.638746 A A B A A B A A A A B B B B B A A B B A B A A B A A A A B B B A B B A B
+1 rs13475833 28.522 42.216521 A A B A A B A A A A B B B B B A A B B A B A A B A A A A B B B A B B A B
+1 rs13475834 29.252 42.52099 A A B A A B A A B A B B B B B A A B B A B A A B A A A A B B B A B B A B
+1 rs13459182 29.252 43.799238 A A B A A B A A B A B B B B B A A B B A B A A B A A A A B B B A B B A B
+1 rs13475840 29.982 44.144843 A A B A A B A A B A B B B B B A A B B A B A A B A A A A B B A A B B A B
+1 rs13475847 29.982 45.969218 A A B A A B A A B A B B B B B A A B B A B A A B A A A A B B A A B B A B
+1 CEL-1_46578837 30.712 46.275022 A A B A A B A A B A B B B B B B A B B A B A A B A A A A B B A A B B A B
+1 rs6322563 30.712 46.92567 A A B A A B A A B A B B B B B B A B B A B A A B A A A A B B A A B B A B
+1 gnf01.044.538 31.442 47.261016 A A B A A B A A B A B B B B B B A B B A B A A B A A A A B B A B B B A B
+1 mCV23591750 31.442 51.301741 A A B A A B A A B A B B B B B B A B B A B A A B A A A A B B A B B B A B
+1 rs13475866 32.172 51.455542 A A B A A B A A B A B B B B B B A B A A B A A B A A A A B B A B B B A B
+1 rs13475870 32.172 51.843141 A A B A A B A A B A B B B B B B A B A A B A A B A A A A B B A B B B A B
+1 rs13475872 32.902 53.068365 B A B A A B A A B A B B B B B B A B A A B A A B A A A A B B A B B B A B
+1 rs13475879 32.902 57.882214 B A B A A B A A B A B B B B B B A B A A B A A B A A A A B B A B B B A B
+1 rs6245700 33.631 59.176496 B A B A A B A A B A B B B B B B A A A A B A A B A A A A B B A B B B A B
+1 D1Mit161 34.361 59.280044 B A B A A B A A B A B B B B B B A A A A B A A B A A A A B B A A B B A B
+1 rs3158157 35.091 61.162379 B A B A A B A A B A B B B B B B A A A A B A A B A A A A B B A A B B A A
+1 rs13475886 35.091 61.228462 B A B A A B A A B A B B B B B B A A A A B A A B A A A A B B A A B B A A
+1 rs13475888 35.821 61.879438 B A B A A B A A B A B B B B B B A A A A B A A B A A A A B B A A B B B A
+1 rs13475891 37.36 62.750755 B A B A A B A A B A B A B B A B A A A A B A A B A A A A B B A A B B B A
+1 rs3726861 37.36 64.732129 B A B A A B A A B A B A B B A B A A A A B A A B A A A A B B A A B B B A
+1 rs6293581 38.09 64.789337 B A B A A B A A B A B A B B A B A A A A B A A B A A A A B B B A B B B A
+1 rs13475896 38.09 65.111595 B A B A A B A A B A B A B B A B A A A A B A A B A A A A B B B A B B B A
+1 rs4137302 39.549 65.557818 B A B A A B A A B A B A B B A B A A A A B A A B A A A B B B A A B B B A
+1 Cryg 38.82 65.702298 B A B A A B A A B A B A B B A B A A A A B A A B A A A B B B B A B B B A
+1 D1Mit76 38.82 65.89642 B A B A A B A A B A B A B B A B A A A A B A A B A A A B B B B A B B B A
+1 rs13475908 39.549 68.393219 B A B A A B A A B A B A B B A B A A A A B A A B A A A B B B A A B B B A
+1 rs6288543 40.279 68.556955 B A B A A B A A A A B A B B A B A A A A B A A B A A A B B B A A B B B A
+1 rs4222426 40.279 72.440963 B A B A A B A A A A B A B B A B A A A A B A A B A A A B B B A A B B B A
+1 D1Mit128 43.729 72.572863 B A B A A B A A A A B A A B A B B B A A B A A A A A A B B B A A B B B A
+1 rs13475920 43.729 73.257785 B A B A A B A A A A B A A B A B B B A A B A A A A A A B B B A A B B B A
+1 rs13475921 45.268 73.46473 B A B A A B A A A A B A A B A B B B A A A A A A A A B B B B A A B B B A
+1 rs3676306 45.268 76.197688 B A B A A B A A A A B A A B A B B B A A A A A A A A B B B B A A B B B A
+1 mCV24115911 45.997 76.524829 B A B A A B A A A A B A A B A B B B A A A A A A A A A B B B A A B B B A
+1 rs3667200 45.997 78.164164 B A B A A B A A A A B A A B A B B B A A A A A A A A A B B B A A B B B A
+1 rs6182343 47.536 78.312524 B A B A A B A A A A B A A B A B B B A A A A B B A A A B B B A A B B B A
+1 rs13475939 49.075 78.684288 B A B A A B A B A A B A A B A B B B A A A A B B A A B B B B A A B B B A
+1 rs3698264 49.805 79.343178 B A B A A B A B A A B A A B A B B A A A A A B B A A B B B B A A B B B A
+1 rs3692549 49.805 79.761257 B A B A A B A B A A B A A B A B B A A A A A B B A A B B B B A A B B B A
+1 rs3675339 50.534 79.900287 B A B A A B A B A A B A A B A B B A A A A A B B A A B B A B A A B B B A
+1 rs13475943 50.534 79.955229 B A B A A B A B A A B A A B A B B A A A A A B B A A B B A B A A B B B A
+1 rs13475947 51.264 80.948248 B A B A A B A B A A B A B B A B B A A A A A B B A A B B A B A A B B B A
+1 rs13475951 51.264 82.023243 B A B A A B A B A A B A B B A B B A A A A A B B A A B B A B A A B B B A
+1 rs3708204 52.803 82.077151 B A B A B B A B A A B A B B B B B A A A A A B B A A B B A B A A B B B A
+1 rs13475954 52.803 82.901013 B A B A B B A B A A B A B B B B B A A A A A B B A A B B A B A A B B B A
+1 rs13475955 53.533 83.335505 B A B A B B A B A A B A B B B B B A A A A A B B A A B B B B A A B B B A
+1 rs3669598 53.533 88.801969 B A B A B B A B A A B A B B B B B A A A A A B B A A B B B B A A B B B A
+1 UT_1_89.100476 54.263 89.095364 B A B A B B A B A A B A B B B B B A A A A A B B A A B B B A A A B B B A
+1 rs6234856 54.263 89.812968 B A B A B B A B A A B A B B B B B A A A A A B B A A B B B A A A B B B A
+1 rs13475970 55.801 90.246344 B A B A B B A B A A B A B B B B A B A A A A B B A A B B B A A A B B B A
+1 rs6195073 56.531 90.479198 B A B A B B A B A A B A B B B B A B A A A A B B A A B B B A B A B B B A
+1 rs13475981 56.531 93.932464 B A B A B B A B A A B A B B B B A B A A A A B B A A B B B A B A B B B A
+1 rs13475982 58.07 94.229305 B A B A B B A B A A B A B B B B A B A B A A B B A A B B B A B A B B B B
+1 D1Mit45 58.822 94.909763 B B B A B B A B A A B A B B B B A B A B A A B B A A B B B A H A B B B B
+1 rs3692309 59.552 95.14808 B B B A B B A B A A B A B B B B A B A B A A B B A A B B B A A A B B B B
+1 rs13475991 59.552 96.419818 B B B A B B A B A A B A B B B B A B A B A A B B A A B B B A A A B B B B
+1 D1Mit386 61.09 102.297058 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A A A B B A B
+1 rs3664662 61.09 106.448509 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A A A B B A B
+1 rs3707424 61.82 107.216998 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A B A B B A B
+1 CEL-1_105566001 61.82 107.541103 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A B A B B A B
+1 rs3692731 62.55 107.878371 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A B A B A A B
+1 D1Mit137 62.55 109.03613 B B B A B B A B A A B A B B B B B B A B A A B B A A B B B A B A B A A B
+1 rs3663003 63.28 110.649835 B B B A B B A B A A B A B B B B B B A B A A B A A A B B B A B A B A A B
+1 rs13476066 63.28 116.8541 B B B A B B A B A A B A B B B B B B A B A A B A A A B B B A B A B A A B
+1 rs13476067 64.01 117.15794 B B B A B B A B A A B A B B B B B B A B A A B A A B B B B A B A B A A B
+1 rs3694901 64.01 118.662553 B B B A B B A B A A B A B B B B B B A B A A B A A B B B B A B A B A A B
+1 rs3694226 64.74 119.0191 B B B A B B A B A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs3695581 64.74 120.637061 B B B A B B A B A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs13476077 65.47 120.871754 B B B A B B A A A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs3694822 65.47 125.741681 B B B A B B A A A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs3687720 66.2 126.908317 B B B B B B A A A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs6228473 66.2 128.523837 B B B B B B A A A A B A B B B B B B A B A A B A B B B B B A B A B A A B
+1 rs3691374 67.738 128.830104 B B B A B B A A A A B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs13476100 67.738 128.842816 B B B A B B A A A A B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs6263067 68.468 129.064812 B B B A B B A A A B B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs13476107 68.468 130.928423 B B B A B B A A A B B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs3678662 70.007 134.378491 B B B B B B A B A B B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs13476119 70.737 136.107289 B B B B B B B B A B B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs13476137 70.737 141.128163 B B B B B B B B A B B A B B B B B B A B A A B A B B B B B A B B B A A B
+1 rs13476138 72.275 141.417667 B B B B B B B B A B B A B A B B B B B B A A B A B B B B B A B B B A A B
+1 mCV23572856 72.275 147.423434 B B B B B B B B A B B A B A B B B B B B A A B A B B B B B A B B B A A B
+1 D1Mit194 73.005 148.87959 B B B B B B B B A B B A B A B B A B B B A A B A B B B B B A B B B A A B
+1 rs3657056 73.005 150.739834 B B B B B B B B A B B A B A B B A B B B A A B A B B B B B A B B B A A B
+1 gnf01.148.750 74.544 151.137795 B B B B B B B B A B B B B A B B A B B B A A B B B B B B B A B B B A A B
+1 gnf01.151.323 74.544 153.751996 B B B B B B B B A B B B B A B B A B B B A A B B B B B B B A B B B A A B
+1 rs6194543 76.983 157.588921 B B B B B B B B A A B B B A B B B B B B A A B B B B B B B A B A B A A B
+1 rs13476194 76.983 158.579244 B B B B B B B B A A B B B A B B B B B B A A B B B B B B B A B A B A A B
+1 rs3721839 77.713 158.662801 B B B B B B B B A A B B B A B B B A B B A A B B B B B B B A B A B A A B
+1 rs3701299 77.713 161.032954 B B B B B B B B A A B B B A B B B A B B A A B B B B B B B A B A B A A B
+1 rs13476203 78.443 161.799451 B B B B B B B B A A B B B A B B B A A B A A B B B B B B B A B A B A A B
+1 rs3701630 78.443 161.813231 B B B B B B B B A A B B B A B B B A A B A A B B B B B B B A B A B A A B
+1 rs13476205 79.173 162.450421 B B B B B B B B A A B B B A B B B A A B A A B B B B B B B A A A B A A B
+1 rs3685643 79.173 164.18019 B B B B B B B B A A B B B A B B B A A B A A B B B B B B B A A A B A A B
+1 rs13476209 79.903 164.410372 B B B B B B B B A A B A B A B B B A A B A A B B B B B B B A A A B A A B
+1 D1Mit452 79.903 165.079658 B B B B B B B B A A B A B A B B B A A B A A B B B B B B B A A A B A A B
+1 rs13476223 83.352 169.640434 B A B B B B B B A B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 gnf01.167.396 83.352 169.907833 B A B B B B B B A B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 rs3714825 84.082 170.146765 B A B B B B B A A B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 rs13476231 84.082 172.239094 B A B B B B B A A B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 D1Mit455 84.812 172.344018 B A B B B B B A B B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 rs13476234 84.812 172.771817 B A B B B B B A B B B B B A B B B A A B A A B B B B A B B A A A B A A B
+1 rs8237062 87.334 173.149074 A A B B B B B A B B B B B A B H B B A A A A B B B B A B B A A A B A A B
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