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path: root/scripts/maintenance/Update_Case_Attributes_MySQL_tab.py
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-rw-r--r--scripts/maintenance/Update_Case_Attributes_MySQL_tab.py23
1 files changed, 9 insertions, 14 deletions
diff --git a/scripts/maintenance/Update_Case_Attributes_MySQL_tab.py b/scripts/maintenance/Update_Case_Attributes_MySQL_tab.py
index bf796df4..a3cd1c35 100644
--- a/scripts/maintenance/Update_Case_Attributes_MySQL_tab.py
+++ b/scripts/maintenance/Update_Case_Attributes_MySQL_tab.py
@@ -10,18 +10,13 @@ import time
import csv
########################################################################
-mydb = MySQLdb.connect(host='localhost',
- user='username',
- passwd='',
- db='db_webqtl')
-cursor = mydb.cursor()
+with MySQLdb.connect(
+ host='localhost', user='username', passwd='', db='db_webqtl') as mydb:
+ with mydb.cursor() as cursor:
-csv_data = csv.reader(file('GN711_pvalues.txt'), delimiter ="\t")
-for row in csv_data:
-
- cursor.execute("""UPDATE ProbeSetXRef SET pValue = %s WHERE ProbeSetFreezeId = %s AND ProbeSetId = %s """,
- (row))
-#close the connection to the database.
-mydb.commit()
-cursor.close()
-print("Done") \ No newline at end of file
+ csv_data = csv.reader(file('GN711_pvalues.txt'), delimiter ="\t")
+ for row in csv_data:
+ cursor.execute(
+ """UPDATE ProbeSetXRef SET pValue = %s WHERE ProbeSetFreezeId = %s AND ProbeSetId = %s """,
+ (row))
+print("Done")