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Diffstat (limited to 'gn2/wqflask/templates/metadata/dataset.html')
| -rw-r--r-- | gn2/wqflask/templates/metadata/dataset.html | 157 |
1 files changed, 157 insertions, 0 deletions
diff --git a/gn2/wqflask/templates/metadata/dataset.html b/gn2/wqflask/templates/metadata/dataset.html new file mode 100644 index 00000000..06df6a68 --- /dev/null +++ b/gn2/wqflask/templates/metadata/dataset.html @@ -0,0 +1,157 @@ +<header class="page-header text-justify"> + <h1> + {% if dataset.title or dataset.label or dataset.altLabel %} + {{ dataset.title or dataset.label or dataset.altLabel }} + {% if dataset.title != dataset.altLabel and dataset.label != dataset.altLabel %} + <br/> + <small>({{ dataset.altLabel }})</small> + {% endif %} + {% else %} + {{ name }} + {% endif %} + </h1> +</header> + +<div class="container dataset-content"> + <div class="panel-about panel panel-info panel-metadata text-muted"> + <div class="panel-heading"> + <strong> + <span class="glyphicon glyphicon-info-sign aria-hidden=true"></span> + Details + </strong> + {% if dataset.accessionId %} + <small> + <a href="https://gn1.genenetwork.org/webqtl/main.py?FormID=sharinginfo&GN_AccessionId={{ dataset.accessionId.split('GN')[-1] }}" target="_blank">(GN1 Link)</a> + </small> + {% endif %} + </div> + <div class="panel-body"> + <dl class="dl-horizontal"> + {% if dataset.label != dataset.altLabel and dataset.label != dataset.title %} + <dt>Name</dt> + <dd> {{ dataset.label }} </dd> + {% endif %} + {% if dataset.created %} + <dt>Created</dt> + <dd>{{ dataset.created }}</dd> + {% endif %} + {% if dataset.inbredSet %} + <dt>Group</dt> + <dd>{{ dataset.inbredSet.label}}</dd> + {% endif %} + + {% if dataset.accessionId %} + <dt>Accession Id</dt> + <dd>{{ dataset.accessionId}}</dd> + {% endif %} + + {% if dataset.hasGeoSeriesId %} + <dt>GEO Series</dt> + <dd> + <a href="{{ dataset.geoSeriesId }}" target="_blank">{{ dataset.geoSeriesId.split("=")[-1] }}</a> + </dd> + {% endif %} + + {% if dataset.tissue %} + <dt>Tissue</dt> + <dd>{{ dataset.tissue.label }}</dd> + {% endif %} + + {% if dataset.platform %} + <dt>Platforms</dt> + <dd> + {{ dataset.platform.label }} + [<a href="{{ dataset.platform.id}}" target="_blank"> + {{ dataset.platform.prefLabel}} + </a>] + </dd> + {% endif %} + + {% if dataset.normalization %} + <dt>Normalization</dt> + <dd>{{ dataset.normalization.label }}</dd> + {% endif %} + + {% if dataset.contactPoint %} + <dt>Investigator</dt> + <dd> + {% if dataset.contactPoint.contactWebUrl %} + <a href="{{ dataset.contactPoint.contactWebUrl }}" target="_blank"> + {{ dataset.contactPoint.contactName }} + </a> + {% else %} + {{ dataset.contactPoint.contactName }} + {% endif %} + </dd> + {% endif %} + + {% if dataset.organization %} + <dt>Organization</dt> + <dd>{{ dataset.organization }}</dd> + {% endif %} + </dl> + </div> + </div> + + <div class="container row dataset-metadata"> + {% if dataset.description %} + <div>{{ dataset.description|safe }}</div> + {% endif %} + + {% if dataset.specificity %} + <h2><strong>Specifics of this Dataset</strong></h2> + <div>{{ dataset.specificity }}</div> + {% endif %} + + {% if dataset.experimentDesignInfo %} + <h3><strong>Experiment Design</strong></h3> + <div>{{ dataset.experimentDesignInfo|safe }}</div> + {% endif %} + + {% if dataset.caseInfo %} + <h3><strong>About the Cases Used to Generate this Dataset:</strong></h3> + <div>{{ dataset.caseInfo|safe }}</div> + {% endif %} + + {% if dataset.tissue %} + <h3><strong>About the Tissue + {%if dataset.tissue and dataset.tissue.label %}({{ dataset.tissue.label }}) + {% endif %}Used to Generate this Dataset</strong></h3> + <div>{{ dataset.tissue.tissueInfo|safe }}</div> + {% endif %} + + {% if dataset.platform %} + <h3 title="{{ dataset.platform.label }}"><strong>About the Array Platform</strong></h3> + <div>{{ dataset.platform.platformInfo|safe }}</div> + {% endif %} + + {% if dataset.processingInfo %} + <h3><strong>About Data Values and Data Processing</strong></h3> + <div>{{ dataset.processingInfo|safe }}</div> + {% endif %} + + {% if dataset.notes %} + <h3><strong>Notes</strong></h3> + <div>{{ dataset.notes|safe }}</div> + {% endif %} + + {% if dataset.citation|trim %} + <h3><strong>Citation</strong></h3> + <div>{{ dataset.citation|safe}}</div> + {% endif %} + + {% if dataset.acknowledgement|trim %} + <h3><strong>Acknowledgment</strong></h3> + <div>{{ dataset.acknowledgement|safe}}</div> + {% endif %} + + {% if dataset.contributors %} + <h3><strong>Contributors</strong></h3> + <div>{{ dataset.contributors|safe }}</div> + {% endif %} + </div> + +</div> + +</div> + |