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-rw-r--r--doc/docker-container.org15
1 files changed, 4 insertions, 11 deletions
diff --git a/doc/docker-container.org b/doc/docker-container.org
index ec91824a..79b8272f 100644
--- a/doc/docker-container.org
+++ b/doc/docker-container.org
@@ -28,17 +28,10 @@ which will be added to a base mariaDB image.
First create the gn2 tar archive by running:
#+begin_src sh
-# For the Python 2 version:
env GUIX_PACKAGE_PATH="/home/bonface/projects/guix-bioinformatics:/home/bonface/projects/guix-past/modules" \
./pre-inst-env guix pack --no-grafts\
-S /gn2-profile=/ \
screen genenetwork2
-
-# For the Python 3 version:
-env GUIX_PACKAGE_PATH="/home/bonface/projects/guix-bioinformatics:/home/bonface/projects/guix-past/modules" \
- ./pre-inst-env guix pack --no-grafts\
- -S /gn2-profile=/ \
- screen python3-genenetwork2
#+end_src
The output will look something similar to:
@@ -59,16 +52,16 @@ RUN tar -xzf /tmp/gn2.tar.gz -C / && rm -f /tmp/gn2.tar.gz && \
Build the image(Note the fullstop at the end):
-: sudo docker build -t python2-genenetwork2:latest -f Dockerfile .
+: sudo docker build -t genenetwork2:latest -f Dockerfile .
To load the image interactively you've just created:
-: docker run -ti "python2-genenetwork2:latest" bash
+: docker run -ti "genenetwork2:latest" bash
Assuming you have a docker instance running, you could always run
commands in it e.g:
-: docker run "python2-genenetwork2:latest" python --version
+: docker run "genenetwork2:latest" python --version
* Pushing to DockerHub
@@ -78,7 +71,7 @@ CI environment using Github Actions.
To push to dockerhub, first get the image name by running =docker
images=. Push to dockerhub using a command similar to:
-: docker push bonfacekilz/python2-genenetwork2:latest
+: docker push bonfacekilz/genenetwork2:latest
Right now, we have 2 images on DockerHub: