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+;;; This file describes a Guix system container to run the database
+;;; services required by genenetwork2 locally on your own
+;;; machine. This is to allow a purely offline development setup for
+;;; hacking on genenetwork2. To build and run the container, use
+;;; db-container.sh.
+
+(use-modules (gnu)
+ (gnu packages databases)
+ (gnu services databases))
+
+(define %mariadb-state-directory
+ "/var/lib/mysql")
+
+(define set-permissions-gexp
+ (with-imported-modules '((guix build utils))
+ #~(begin
+ (use-modules (guix build utils))
+
+ ;; Set ownership of mariadb state directory.
+ (let ((user (getpw "mysql")))
+ (for-each (lambda (file)
+ (chown file (passwd:uid user) (passwd:gid user)))
+ (find-files #$%mariadb-state-directory #:directories? #t))))))
+
+(operating-system
+ (host-name "genenetwork2")
+ (timezone "Etc/UTC")
+ (locale "en_US.utf8")
+ (bootloader (bootloader-configuration
+ (bootloader grub-bootloader)
+ (targets (list "does-not-matter"))))
+ (file-systems %base-file-systems)
+ (services (cons* (service mysql-service-type)
+ (service redis-service-type)
+ (simple-service 'set-permissions
+ activation-service-type
+ set-permissions-gexp)
+ %base-services)))