diff options
| -rw-r--r-- | wqflask/wqflask/templates/edit_case_attributes.html | 98 | ||||
| -rw-r--r-- | wqflask/wqflask/views.py | 27 |
2 files changed, 125 insertions, 0 deletions
diff --git a/wqflask/wqflask/templates/edit_case_attributes.html b/wqflask/wqflask/templates/edit_case_attributes.html new file mode 100644 index 00000000..e3b6a715 --- /dev/null +++ b/wqflask/wqflask/templates/edit_case_attributes.html @@ -0,0 +1,98 @@ +{%extends "base.html"%} +{%block title%}Edit Case Attributes{%endblock%} + +{%block css%} +<link rel="stylesheet" type="text/css" + href="/css/DataTables/css/jquery.dataTables.css" /> +<link rel="stylesheet" type="text/css" + href="https://code.jquery.com/ui/1.12.1/themes/base/jquery-ui.css" /> +<link rel="stylesheet" type="text/css" href="/static/new/css/show_trait.css" /> + +<style> + .table-fixed-head {overflow-y: auto; height: 32em;} + .table-fixed-head thead th {position: sticky; top: 0;} +</style> +{%endblock%} + +{%block content%} +<div class="container"> + <h1>{{inbredset_group.InbredSetName}}: Edit Case-Attributes</h1> + + <h3>Instructions</h3> + <ul> + <li> + The table is scrollable. Scroll to find the strain(s) you want to edit. + </li> + <li>Change value(s) to edit them in the database.</li> + <li>Delete value(s) to delete them from the database.</li> + <li>Click "Submit" to submit all the changes you have made</li> + <li> + Click "Reset" to undo <strong>ALL</strong> the changes you have made and + start over. + </li> + </ul> + + <form method="POST" action="#"> + <div class="form-group" style="text-align: center; padding: 1em 0 0 0;"> + <input type="submit" value="Submit" class="btn btn-primary" /> + <input type="reset" value="Reset" class="btn btn-warning" /> + </div> + + <div class="table-fixed-head"> + <table class="table-hover table-striped cell-border dataTable no-footer"> + <thead> + <tr> + <th>Sample/Strain</th> + {%for caname in case_attribute_names%} + <th>{{caname.Name}}</th> + {%endfor%} + </tr> + </thead> + <tbody> + {%for strain in strains%} + <tr> + <div class="form-group"> + <td>{{strain.Name}}</td> + {%for attr in case_attribute_names%} + {%if case_attribute_values.get(strain.Name)%} + <td> + <input type="text" + value="{{case_attribute_values[strain.Name]['case-attributes'].get(attr.Name, '')}}" + name="new:{{strain.Name}}:{{attr.Name}}" + class="form-control" /> + </td> + {%else%} + <td> + <input type="text" + value="" + name="new:{{strain.Name}}:{{attr.Name}}" + class="form-control" /> + </td> + {%endif%} + {%endfor%} + </div> + </tr> + {%else%} + <tr> + <td colspan="{{case_attribute_names | length + 1}}"> + No samples/strains for this InbredSet group. + </td> + </tr> + {%endfor%} + </tbody> + </table> + </div> + + <div class="form-group" style="text-align: center; padding: 1em 0 0 0;"> + <input type="submit" value="Submit" class="btn btn-primary" /> + <input type="reset" value="Reset" class="btn btn-warning" /> + </div> + </form> +</div> +{%endblock%} + +{%block js%} +<script language="javascript" + type="text/javascript" + src="{{url_for('js', filename='DataTables/js/jquery.js')}}"></script> +{%endblock%} diff --git a/wqflask/wqflask/views.py b/wqflask/wqflask/views.py index 87202170..eba9dedb 100644 --- a/wqflask/wqflask/views.py +++ b/wqflask/wqflask/views.py @@ -1154,3 +1154,30 @@ def get_genotype(name): "genotype.html", metadata=metadata, ) + +@app.route("/case-attribute/<int:inbredset_id>/edit") +def edit_case_attributes(inbredset_id: int) -> Response: + """ + Edit the case-attributes for InbredSet group identified by `inbredset_id`. + """ + from wqflask.oauth2 import client + + def __fetch_strains__(inbredset_group): + return client.get(f"case-attribute/{inbredset_id}/strains").then( + lambda strains: {**inbredset_group, "strains": strains}) + + def __fetch_names__(strains): + return client.get(f"case-attribute/{inbredset_id}/names").then( + lambda canames: {**strains, "case_attribute_names": canames}) + + def __fetch_values__(canames): + return client.get(f"case-attribute/{inbredset_id}/values").then( + lambda cavalues: {**canames, "case_attribute_values": { + value["StrainName"]: value for value in cavalues}}) + + return client.get(f"case-attribute/{inbredset_id}").then( + lambda iset_group: {"inbredset_group": iset_group}).then( + __fetch_strains__).then(__fetch_names__).then( + __fetch_values__).either( + lambda err: err, ## TODO: Handle error better + lambda values: render_template("edit_case_attributes.html", **values)) |