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-rw-r--r--wqflask/tests/unit/wqflask/show_trait/test_export_trait_data.py61
1 files changed, 0 insertions, 61 deletions
diff --git a/wqflask/tests/unit/wqflask/show_trait/test_export_trait_data.py b/wqflask/tests/unit/wqflask/show_trait/test_export_trait_data.py
index 6dbdf4fc..f351c1ec 100644
--- a/wqflask/tests/unit/wqflask/show_trait/test_export_trait_data.py
+++ b/wqflask/tests/unit/wqflask/show_trait/test_export_trait_data.py
@@ -60,67 +60,6 @@ class TestExportTraits(unittest.TestCase):
self.assertEqual(results, expected)
-
- @mock.patch("wqflask.show_trait.export_trait_data.dict_to_sorted_list")
- @mock.patch("wqflask.show_trait.export_trait_data.get_export_metadata")
- def test_export_sample_table(self, exp_metadata, dict_list):
- """test for exporting sample table"""
- targs_obj = {
- "export_data": """{
- "primary_samples": [
- {
- "other": "germanotta",
- "name": "Sauroniops",
- "se":{
- "name":"S2"
- },
- "num_cases":{
- "k1":"value"
-
- }
- }
- ],
- "other_samples": [
- {
- "se": 1,
- "num_cases": 4,
- "value": 6,
- "name": 3
- }
- ]
- }""",
- "trait_display_name": "Hair_color",
- "trait_id": "23177fdc-312e-4084-ad0c-f3eae785fff5",
- "dataset": {
- }
- }
- exp_metadata.return_value = [
- ["Phenotype ID:0a2be192-57f5-400b-bbbd-0cf50135995f"], ['Group:gp1'],
- ["Phenotype:p1"], [
- "Authors:N/A"],
- ["Title:research1"],
- ["Journal:N/A"],
- ["Dataset Link: http://gn1.genenetwork.org/webqtl/main.py?FormID=sharinginfo&InfoPageName=name1"], []]
- expected = ('Hair_color',
- [['Phenotype ID:0a2be192-57f5-400b-bbbd-0cf50135995f'],
- ['Group:gp1'],
- ['Phenotype:p1'],
- ['Authors:N/A'],
- ['Title:research1'],
- ['Journal:N/A'],
- ['Dataset Link: '
- 'http://gn1.genenetwork.org/webqtl/main.py?FormID=sharinginfo&InfoPageName=name1'],
- [],
- ['Name', 'Value', 'SE', 'N'],
- ['Sauroniops', 'germanotta'],
- [3, 6, 1, 4]])
-
- dict_list.side_effect = [['Sauroniops', 'germanotta'], [3, 6, 1, 4]]
-
- self.assertEqual(export_sample_table(targs_obj), expected)
- exp_metadata.assert_called_with(
- "23177fdc-312e-4084-ad0c-f3eae785fff5", {})
- self.assertEqual(dict_list.call_count, 2)
def test_dict_to_sortedlist(self):
"""test for conversion of dict to sorted list"""