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author | Alexander Kabui | 2020-11-27 19:59:17 +0300 |
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committer | Alexander Kabui | 2020-11-27 19:59:17 +0300 |
commit | 7f35213b64707e7c61affb6fa376f561200ac1d6 (patch) | |
tree | 8f9a2d247e23e7fc1052f857ae17d84ad10b56c6 /wqflask | |
parent | 8485dfd5aa02f451a646f643f503ccb02779430b (diff) | |
download | genenetwork2-7f35213b64707e7c61affb6fa376f561200ac1d6.tar.gz |
move tests to unit folder
Diffstat (limited to 'wqflask')
-rw-r--r-- | wqflask/tests/unit/wqflask/marker_regression/test_gemma_mapping.py (renamed from wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py) | 6 | ||||
-rw-r--r-- | wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py (renamed from wqflask/tests/wqflask/marker_regression/test_plink_mapping.py) | 0 | ||||
-rw-r--r-- | wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py (renamed from wqflask/tests/wqflask/marker_regression/test_qtlreaper_mapping.py) | 0 | ||||
-rw-r--r-- | wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py (renamed from wqflask/tests/wqflask/marker_regression/test_rqtl_mapping.py) | 0 | ||||
-rw-r--r-- | wqflask/tests/unit/wqflask/marker_regression/test_run_mapping.py (renamed from wqflask/tests/wqflask/marker_regression/test_run_mapping.py) | 4 |
5 files changed, 5 insertions, 5 deletions
diff --git a/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_gemma_mapping.py index 4fafd95a..5b621264 100644 --- a/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py +++ b/wqflask/tests/unit/wqflask/marker_regression/test_gemma_mapping.py @@ -15,7 +15,7 @@ class AttributeSetter: setattr(self, key, val) -class MockDatasetGroup(AttributeSetter): +class MockGroup(AttributeSetter): def get_samplelist(self): return None @@ -55,7 +55,7 @@ class TestGemmaMapping(unittest.TestCase): for i in range(1, 5): chromosomes.append(AttributeSetter({"name": f"CH{i}"})) chromo = AttributeSetter({"chromosomes": chromosomes}) - dataset_group = MockDatasetGroup( + dataset_group = MockGroup( {"name": "GP1", "genofile": "file_geno"}) dataset = AttributeSetter({"group": dataset_group, "name": "dataset1_name", "species": AttributeSetter({"chromosomes": chromo})}) @@ -113,7 +113,7 @@ class TestGemmaMapping(unittest.TestCase): create_dataset.side_effect = create_trait_side_effect create_trait.side_effect = create_trait_side_effect - group = MockDatasetGroup({"name": "group_X", "samplelist": samplelist}) + group = MockGroup({"name": "group_X", "samplelist": samplelist}) this_dataset = AttributeSetter({"group": group}) flat_files.return_value = "Home/Genenetwork" diff --git a/wqflask/tests/wqflask/marker_regression/test_plink_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py index 428f45b9..428f45b9 100644 --- a/wqflask/tests/wqflask/marker_regression/test_plink_mapping.py +++ b/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py diff --git a/wqflask/tests/wqflask/marker_regression/test_qtlreaper_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py index b47f877a..b47f877a 100644 --- a/wqflask/tests/wqflask/marker_regression/test_qtlreaper_mapping.py +++ b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py diff --git a/wqflask/tests/wqflask/marker_regression/test_rqtl_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py index 69f53721..69f53721 100644 --- a/wqflask/tests/wqflask/marker_regression/test_rqtl_mapping.py +++ b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py diff --git a/wqflask/tests/wqflask/marker_regression/test_run_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_run_mapping.py index a134f551..4129cc0c 100644 --- a/wqflask/tests/wqflask/marker_regression/test_run_mapping.py +++ b/wqflask/tests/unit/wqflask/marker_regression/test_run_mapping.py @@ -17,7 +17,7 @@ class AttributeSetter: setattr(self, k, v) -class MockDataSetGroup(AttributeSetter): +class MockGroup(AttributeSetter): def get_genofiles(self): return [{"location": "~/genofiles/g1_file", "sample_list": ["S1", "S2", "S3", "S4"]}] @@ -26,7 +26,7 @@ class MockDataSetGroup(AttributeSetter): class TestRunMapping(unittest.TestCase): def setUp(self): - self.group = MockDataSetGroup( + self.group = MockGroup( {"genofile": "~/genofiles/g1_file", "name": "GP1_", "species": "Human"}) chromosomes = { "3": AttributeSetter({ |