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authorDannyArends2015-10-07 15:00:05 +0200
committerDannyArends2015-10-07 15:00:05 +0200
commit2e30a64ca583d990cd46bb9eafdad7d84b46b48d (patch)
treeda64bae1c8d4b34aacbfae227488a85169680d45 /wqflask
parentce847df45dacefd2727ee05c58b54863251f2d5b (diff)
downloadgenenetwork2-2e30a64ca583d990cd46bb9eafdad7d84b46b48d.tar.gz
The results now show the soft thresholds table, and the gene <-> module table
Diffstat (limited to 'wqflask')
-rw-r--r--wqflask/wqflask/templates/wgcna_results.html32
1 files changed, 26 insertions, 6 deletions
diff --git a/wqflask/wqflask/templates/wgcna_results.html b/wqflask/wqflask/templates/wgcna_results.html
index b8a4a4f5..077238a5 100644
--- a/wqflask/wqflask/templates/wgcna_results.html
+++ b/wqflask/wqflask/templates/wgcna_results.html
@@ -4,13 +4,33 @@
{% block content %} <!-- Start of body -->
<div class="container">
<h1>WGCNA Results</h1>
- Phenotype / Module table:
- <table>
- <tr><th>Phenotype</th><th>Module</th><th>Weight</th></tr>
- {% for k in results['network'] %}
- <tr><td>{{k}}</td><td>&nbsp;</td><td>&nbsp;</td></tr>
- {% endfor %}
+ <h4>Soft threshold table</h4>
+ <table width="80%">
+ <tr><th>Power</th><th>SFT.R.sq</th><th>slope</th><th>truncated.R.sq</th><th>mean.k</th><th>median.k</th><th>max.k</th><th>Analysis</th></tr>
+ {% for r in range(powers[0][0]|length) %}
+ <tr>
+ {% for c in range(powers[0]|length) %}
+ <td>{{powers[0][c][r]|round(3)}}</td>
+ {% endfor %}
+ <td><input type="submit" value="Redo use power = {{powers[0][0][r]}}" /></td></tr>
+ {% endfor %}
</table>
+
+ <h4>Phenotype / Module table</h4>
+
+ debug: {{results['network']|length}}
+ debug: {{results['network'][0]|length}}
+ {{phenotypes[0][0]}}
+ <table width="80%">
+ <tr><th>Phenotype</th><th>Module</th></tr>
+ {% for r in range(results['network'][0]|length) %}
+ <tr>
+ <td>{{phenotypes[r][0]}}</td>
+ <td>{{results['network'][0][r]}}</td>
+ </tr>
+ {% endfor %}
+ </table>
+
<h2>WGCNA module plot</h2>
<a href="/tmp/{{ results['imgurl'] }}">
<img alt="Embedded Image" src="data:image/png;base64,