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| author | Pjotr Prins | 2015-03-13 11:50:43 +0300 |
|---|---|---|
| committer | Pjotr Prins | 2015-03-13 11:50:43 +0300 |
| commit | 08054314542485da15fc2d2c1903d844348a4fe3 (patch) | |
| tree | 0fe2e3001e8778eb88acd22b28e23280580333ff /wqflask | |
| parent | 7c7ace427c8dfa81d3448250d9697b4e00418d34 (diff) | |
| download | genenetwork2-08054314542485da15fc2d2c1903d844348a4fe3.tar.gz | |
runlmm.py: remove extraneous conversion
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/runlmm.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py index 16e88419..69a80411 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py @@ -98,7 +98,7 @@ if cmd == 'redis': gnt = np.array(gn).T Y,G = removeMissingPhenotypes(y,gnt,options.verbose) print "G",G.shape,G - ps, ts = gn2_load_redis('testrun','other',np.array(k),Y,G,options.testing) + ps, ts = gn2_load_redis('testrun','other',k,Y,G,options.testing) print np.array(ps) print round(ps[0],4) assert(options.testing and round(ps[0],4)==0.7262) |