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| author | Alexander_Kabui | 2022-08-15 00:47:21 +0300 |
|---|---|---|
| committer | Alexander_Kabui | 2022-08-15 00:47:21 +0300 |
| commit | cda1370d5712ae3c756215ef848dedc99cd5504d (patch) | |
| tree | 6a4216b7424ec4ab3bad6b5f0287adf1170e60cd /wqflask | |
| parent | 6ea9c44c442791b6140c25c9f4edc7a92fb25c57 (diff) | |
| download | genenetwork2-cda1370d5712ae3c756215ef848dedc99cd5504d.tar.gz | |
add default values for num overlap,corr_coeff
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/correlation/show_corr_results.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py index 1c391386..f5fdd9b3 100644 --- a/wqflask/wqflask/correlation/show_corr_results.py +++ b/wqflask/wqflask/correlation/show_corr_results.py @@ -121,9 +121,9 @@ def correlation_json_for_table(correlation_data, this_trait, this_dataset, targe results_dict['dataset'] = target_dataset['name'] results_dict['hmac'] = hmac.data_hmac( '{}:{}'.format(target_trait['name'], target_dataset['name'])) - results_dict['sample_r'] = f"{float(trait['corr_coefficient']):.3f}" - results_dict['num_overlap'] = trait['num_overlap'] - results_dict['sample_p'] = f"{float(trait['p_value']):.3e}" + results_dict['sample_r'] = f"{float(trait.get('corr_coefficient',0.0)):.3f}" + results_dict['num_overlap'] = trait.get('num_overlap',0) + results_dict['sample_p'] = f"{float(trait.get('p_value',0)):.3e}" if target_dataset['type'] == "ProbeSet": results_dict['symbol'] = target_trait['symbol'] results_dict['description'] = "N/A" |