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authorPjotr Prins2016-10-05 08:07:05 +0000
committerPjotr Prins2016-10-05 08:07:58 +0000
commitec0d6b9ee8ff1ec3baafb3967dcf5c28e4a823b6 (patch)
tree9a1d2fbe7b8e1bf2eb972f4fd71181f40ed8983a /wqflask
parentd74fab1e7fc5fd3c7646f594714b6a34e4b7a31f (diff)
downloadgenenetwork2-ec0d6b9ee8ff1ec3baafb3967dcf5c28e4a823b6.tar.gz
Reverted on genotype selector on page show_trait_mapping_tools.html - pending the full PR
Diffstat (limited to 'wqflask')
-rw-r--r--wqflask/wqflask/templates/show_trait_mapping_tools.html38
1 files changed, 13 insertions, 25 deletions
diff --git a/wqflask/wqflask/templates/show_trait_mapping_tools.html b/wqflask/wqflask/templates/show_trait_mapping_tools.html
index 9c1101ca..0f293942 100644
--- a/wqflask/wqflask/templates/show_trait_mapping_tools.html
+++ b/wqflask/wqflask/templates/show_trait_mapping_tools.html
@@ -2,7 +2,7 @@
{% if (use_pylmm_rqtl and dataset.group.species != "human") or use_plink_gemma %}
<div class="col-xs-4">
<div class="tabbable"> <!-- Only required for left/right tabs -->
-
+
<ul class="nav nav-pills">
{% if use_pylmm_rqtl and not use_plink_gemma and dataset.group.species != "human" %}
<li class="active">
@@ -32,18 +32,6 @@
{% if use_pylmm_rqtl and not use_plink_gemma and dataset.group.species != "human" %}
<div class="tab-pane active" id="interval_mapping">
<div style="margin-top: 20px" class="form-horizontal">
- {% if genofiles and genofiles|length>0 %}
- <div class="mapping_method_fields form-group">
- <label for="genofiles" class="col-xs-3 control-label">Geno&nbsp;File</label>
- <div style="margin-left: 20px;" class="col-xs-4 controls">
- <select name="genofile" class="form-control">
- {% for item in genofiles %}
- <option value="{{item[0]}}">{{item[1]}}</option>
- {% endfor %}
- </select>
- </div>
- </div>
- {% endif %}
<div class="mapping_method_fields form-group">
<label for="mapping_permutations" class="col-xs-3 control-label">Permutations</label>
<div style="margin-left: 20px;" class="col-xs-4 controls">
@@ -73,7 +61,7 @@
No
</label>
</div>
- </div>
+ </div>
<!--
<div class="mapping_method_fields form-group">
@@ -87,7 +75,7 @@
<div class="mapping_method_fields form-group">
<label style="text-align:left;" class="col-xs-12 control-label">Display Additive Effect</label>
- <div class="col-xs-12 controls" id="display_additive_effect">
+ <div class="col-xs-12 controls" id="display_additive_effect">
<label class="radio-inline">
<input type="radio" name="display_additive" id="display_additive" value="yes" checked="">
Yes
@@ -103,7 +91,7 @@
<div class="mapping_method_fields form-group">
<label style="text-align:left;" class="col-xs-3 control-label">Marker<br>Regression</label>
- <div style="margin-left: 20px;" class="col-xs-4 controls">
+ <div style="margin-left: 20px;" class="col-xs-4 controls">
<label class="radio-inline">
<input type="radio" name="manhattan_plot_reaper" value="True">
Yes
@@ -158,7 +146,7 @@
<div class="mapping_method_fields form-group">
<label style="text-align:left;" class="col-xs-12 control-label">Manhattan Plot</label>
- <div class="col-xs-12 controls">
+ <div class="col-xs-12 controls">
<label class="radio-inline">
<input type="radio" name="manhattan_plot_pylmm" value="True">
Yes
@@ -179,7 +167,7 @@
</div>
</div>
<div class="tab-pane" id="rqtl_geno">
-
+
<div style="margin-top: 20px" class="form-horizontal">
<div class="mapping_method_fields form-group">
<label for="mapping_permutations" class="col-xs-3 control-label">Permutations</label>
@@ -238,7 +226,7 @@
<div class="mapping_method_fields form-group">
<label style="text-align:left;" class="col-xs-12 control-label">Pair Scan</label>
- <div class="col-xs-12 controls">
+ <div class="col-xs-12 controls">
<label class="radio-inline">
<input type="radio" name="pair_scan" value="true">
Yes
@@ -252,7 +240,7 @@
<div class="mapping_method_fields form-group">
<label style="text-align:left;" class="col-xs-12 control-label">Manhattan Plot</label>
- <div class="col-xs-12 controls">
+ <div class="col-xs-12 controls">
<label class="radio-inline">
<input type="radio" name="manhattan_plot_rqtl" value="True">
Yes
@@ -284,7 +272,7 @@
</div>
</div>
</div>
-
+
<div class="form-group">
<label for="plink_compute" class="col-xs-1 control-label"></label>
<div style="margin-left:20px;" class="col-xs-4 controls">
@@ -294,7 +282,7 @@
</div>
</div>
</div>
-
+
<div class="tab-pane" id="gemma">
<div style="padding: 20px" class="form-horizontal">
<div class="mapping_method_fields form-group">
@@ -304,7 +292,7 @@
</div>
</div>
</div>
-
+
<div class="form-group">
<label for="gemma_compute" class="col-xs-1 control-label"></label>
<div style="margin-left:20px;" class="col-xs-4 controls">
@@ -313,12 +301,12 @@
</button>
</div>
</div>
- </div>
+ </div>
{% endif %}
</div>
</div>
</div>
- <div class="col-xs-6">
+ <div class="col-xs-6">
<dl>
<dt>Interval Mapping</dt>
<dd>Interval mapping is a process in which the statistical significance of a hypothetical QTL is evaluated at regular points across a chromosome, even in the absence of explicit genotype data at those points.</dd>