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| author | zsloan | 2019-12-11 11:09:33 -0600 |
|---|---|---|
| committer | zsloan | 2019-12-11 11:09:33 -0600 |
| commit | a5c95ecda29c434c1475635921d77aa35c39033d (patch) | |
| tree | ac7fbb7b6ef3c941893bd886078733531ef4ea39 /wqflask | |
| parent | cd08e12d586f21053afdcd3517c2bf3e698fc1cc (diff) | |
| download | genenetwork2-a5c95ecda29c434c1475635921d77aa35c39033d.tar.gz | |
Added some text explaining the new option to specifiy chromosome for cis/trans LRS searches, though Rob will probably want to edit
Diffstat (limited to 'wqflask')
| -rwxr-xr-x | wqflask/wqflask/templates/index_page_orig.html | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/wqflask/wqflask/templates/index_page_orig.html b/wqflask/wqflask/templates/index_page_orig.html index 8c7ea3cf..10f7e0dd 100755 --- a/wqflask/wqflask/templates/index_page_orig.html +++ b/wqflask/wqflask/templates/index_page_orig.html @@ -158,7 +158,8 @@ with an <b>inclusion</b> zone of 5 Mb around the parent gene.</li> <li><b>transLRS=(15 1000 5)</b> or <b>transLOD=(2 8 5)</b> finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits, - with an <b>exclusion</b> zone of 5 Mb around the parent gene.</li> + with an <b>exclusion</b> zone of 5 Mb around the parent gene. You can also add a fourth term specifying which chromosome you want the transLRS to be on + (for example transLRS=(15 1000 5 7) would find all trans eQTLs with peak LRS on chromosome 7 that is also a trans eQTL with exclusionary zone of 5Mb).</li> <li><b>POSITION=(Chr4 122 130) cisLRS=(9 999 10)</b> finds all traits on Chr 4 from 122 and 155 Mb with cisLRS scores |