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authorzsloan2017-06-09 17:19:36 +0000
committerzsloan2017-06-09 17:19:36 +0000
commitbe458ca49557b93d2e5b8a0407d42f0a2fe9673f (patch)
treec9edde6df437e30eefe5834d6445b82897b90e2f /wqflask/wqflask/templates/network_graph.html
parent87d409765773c32ba4f53aede5dbc1e54bddadae (diff)
downloadgenenetwork2-be458ca49557b93d2e5b8a0407d42f0a2fe9673f.tar.gz
- Changed the way the genofile is set so different genofiles can be selected for mapping
- Now shows error page for Correlation Matrix if traits aren't all from the same group (later need to make it check for shared samples, since different groups may contain some of the same samples
- Mapping results page now displays the genofile in the information section
- Only show Interval Analyst if species is mouse or rat (previously it would show a blank table for other species)
- Network Graph now only shows links in a node's info if the relevant information (for example geneid) exists, and the label changes depending on the type of data set
- Other minor changes to the appearance of the Network Graph menu (less white space, plus clickable descriptions for a couple options)
- Improved Correlations Results page to shorten Description and Authors cell content for Phenotype traits (to keep table width manageable)
- Changed the glossary links for LRS and Additive Effect columns for Gene Global Search
- Improved appearance for Phenotype Global Search results
- Temporarily removed Mapping options/features that don't work from the trait page
Diffstat (limited to 'wqflask/wqflask/templates/network_graph.html')
-rw-r--r--wqflask/wqflask/templates/network_graph.html23
1 files changed, 11 insertions, 12 deletions
diff --git a/wqflask/wqflask/templates/network_graph.html b/wqflask/wqflask/templates/network_graph.html
index 50c0c230..24293de6 100644
--- a/wqflask/wqflask/templates/network_graph.html
+++ b/wqflask/wqflask/templates/network_graph.html
@@ -17,7 +17,7 @@
         <div class="row" >
           <div id="content">
             <div id="secondaryContent" class="col-xs-3">
-                <h3> Visualization Options</h3>
+                <h3 style="margin-top:0px; margin-bottom: 5px;"> Visualization Options</h3>
                 <table border="0">
                   <tbody>
                     <tr>
@@ -27,12 +27,13 @@
                     </tr>
                     <tr>
                       <td>
-                        Focus Trait
+                        Focus Trait<sup title="Only show edges connected to the specified node" style="color:#f00"> ?</sup>
                       </td>
                     </tr>
                     <tr>
                       <td>
                         <select name="focus_select">
+                          <option disabled selected value>Select Trait</option>
                           {% for trait in traits %}
                           <option value="{{ trait.name }}:{{ trait.dataset.name }}">{{ trait.symbol }} ({{ trait.name }})</option>
                           {% endfor %}
@@ -40,17 +41,15 @@
                       </td>
                     </tr>    
                     <tr>
-                      <td colspan="1">Correlation Coefficient</td>
-                    </tr>
-                    <tr>
-                      <td>
-                        <font size="2"><b>0 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
-                                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
-                                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; +/- 1</b></font>
+                      <td colspan="1">
+                         Correlation Coefficient<sup title="Filter edges to only show correlations less than the negative value specified with the slider and greater than the positive value. For example, moving the slider half way will display correlations less than -0.5 and greater than 0.5" style="color:#f00"> ?</sup>
                       </td>
                     </tr>
                     <tr>
-                      <td>
+                      <td colspan="1">
+                        <font size="2"><b>0 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
+                                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
+                                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; +/- 1</b></font><br>
                         <input type="range" id="slide" min="0" max="1" value="0" step="0.001" list="corr_range">
                       </td>
                     </tr>
@@ -73,7 +72,7 @@
                     </tr>                          
                   </tbody>
                 </table>    
-                <h3> Download</h3>
+                <h3 style="margin-bottom: 5px;"> Download</h3>
                 <table>
                   <tbody>
                     <tr>
@@ -86,7 +85,7 @@
                   </tbody>
                 </table>
             </div>
-            <div id="cytoscapeweb" class="col-xs-9" style="min-height:700px !important;"></div>
+            <div id="cytoscapeweb" class="col-xs-9" style="height:700px !important; border-style: solid; border-width: 1px; border-color: grey;"></div>
           </div>
         </div>
     </div>