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| author | Zachary Sloan | 2013-08-14 17:25:52 -0500 |
|---|---|---|
| committer | Zachary Sloan | 2013-08-14 17:25:52 -0500 |
| commit | 26b1883a8fe4053b59833178f44e047157f2fc9c (patch) | |
| tree | d2359e5952f6062d75ba1f43f1804a7b6df284c9 /wqflask/utility/helper_functions.py | |
| parent | eea1c38a9851f31011787b27c14365211a06ea51 (diff) | |
| parent | 6379959af53b2ec595b85ccdc099c6f14adf0381 (diff) | |
| download | genenetwork2-26b1883a8fe4053b59833178f44e047157f2fc9c.tar.gz | |
Merge branch 'master' of https://github.com/zsloan/genenetwork
Diffstat (limited to 'wqflask/utility/helper_functions.py')
| -rw-r--r-- | wqflask/utility/helper_functions.py | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/wqflask/utility/helper_functions.py b/wqflask/utility/helper_functions.py index d76a32ce..44f5321e 100644 --- a/wqflask/utility/helper_functions.py +++ b/wqflask/utility/helper_functions.py @@ -8,11 +8,14 @@ from base.species import TheSpecies def get_species_dataset_trait(self, start_vars): #assert type(read_genotype) == type(bool()), "Expecting boolean value for read_genotype" self.dataset = data_set.create_dataset(start_vars['dataset']) + print("After creating dataset") self.species = TheSpecies(dataset=self.dataset) + print("After creating species") self.this_trait = GeneralTrait(dataset=self.dataset, name=start_vars['trait_id'], cellid=None) + print("After creating trait") #if read_genotype: - self.dataset.group.read_genotype_file() + #self.dataset.group.read_genotype_file() #self.genotype = self.dataset.group.genotype |