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author | zsloan | 2016-06-20 11:03:20 -0500 |
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committer | GitHub | 2016-06-20 11:03:20 -0500 |
commit | 8222ef16d443dc41db9d7e09b1af400d8d866854 (patch) | |
tree | e4f5b49aa21c32aa2b770b1a65c8fef7782b625f /wqflask/utility/corr_result_helpers.py | |
parent | d90dc3748557d1d6fbaa59f71fe676b8a7c393ca (diff) | |
parent | 10df36b60273d81678f6630c07a2d8e5a6409282 (diff) | |
download | genenetwork2-8222ef16d443dc41db9d7e09b1af400d8d866854.tar.gz |
Merge pull request #168 from genenetwork/staging
Staging
Diffstat (limited to 'wqflask/utility/corr_result_helpers.py')
-rwxr-xr-x | wqflask/utility/corr_result_helpers.py | 18 |
1 files changed, 9 insertions, 9 deletions
diff --git a/wqflask/utility/corr_result_helpers.py b/wqflask/utility/corr_result_helpers.py index a253026c..ef644d85 100755 --- a/wqflask/utility/corr_result_helpers.py +++ b/wqflask/utility/corr_result_helpers.py @@ -1,16 +1,16 @@ def normalize_values(a_values, b_values): """ Trim two lists of values to contain only the values they both share - + Given two lists of sample values, trim each list so that it contains only the samples that contain a value in both lists. Also returns the number of such samples. - + >>> normalize_values([2.3, None, None, 3.2, 4.1, 5], [3.4, 7.2, 1.3, None, 6.2, 4.1]) ([2.3, 4.1, 5], [3.4, 6.2, 4.1], 3) - + """ - + min_length = min(len(a_values), len(b_values)) a_new = [] b_new = [] @@ -18,10 +18,10 @@ def normalize_values(a_values, b_values): if a_values[counter] and b_values[counter]: a_new.append(a_values[counter]) b_new.append(b_values[counter]) - + num_overlap = len(a_new) assert num_overlap == len(b_new), "Lengths should be the same" - + return a_new, b_new, num_overlap @@ -37,16 +37,16 @@ def common_keys(a_samples, b_samples): def normalize_values_with_samples(a_samples, b_samples): common_samples = common_keys(a_samples, b_samples) - + a_new = {} b_new = {} for sample in common_samples: a_new[sample] = a_samples[sample] b_new[sample] = b_samples[sample] - + num_overlap = len(a_new) assert num_overlap == len(b_new), "Lengths should be the same" - + return a_new, b_new, num_overlap |