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author | Arthur Centeno | 2021-10-25 21:04:23 +0000 |
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committer | Arthur Centeno | 2021-10-25 21:04:23 +0000 |
commit | 499a80f138030c4de1629c043c8f9401a99894ea (patch) | |
tree | 449dcae965d13f966fb6d52625fbc86661c8c6a0 /wqflask/utility/corr_result_helpers.py | |
parent | 6151faa9ea67af4bf4ea95fb681a9dc4319474b6 (diff) | |
parent | 700802303e5e8221a9d591ba985d6607aa61e1ce (diff) | |
download | genenetwork2-499a80f138030c4de1629c043c8f9401a99894ea.tar.gz |
Merge github.com:genenetwork/genenetwork2 into acenteno
Diffstat (limited to 'wqflask/utility/corr_result_helpers.py')
-rw-r--r-- | wqflask/utility/corr_result_helpers.py | 26 |
1 files changed, 6 insertions, 20 deletions
diff --git a/wqflask/utility/corr_result_helpers.py b/wqflask/utility/corr_result_helpers.py index b543c589..ea3ababf 100644 --- a/wqflask/utility/corr_result_helpers.py +++ b/wqflask/utility/corr_result_helpers.py @@ -14,15 +14,11 @@ def normalize_values(a_values, b_values): min_length = min(len(a_values), len(b_values)) a_new = [] b_new = [] - for counter in range(min_length): - if (a_values[counter] or a_values[counter] == 0) and (b_values[counter] or b_values[counter] == 0): - a_new.append(a_values[counter]) - b_new.append(b_values[counter]) - - num_overlap = len(a_new) - assert num_overlap == len(b_new), "Lengths should be the same" - - return a_new, b_new, num_overlap + for a, b in zip(a_values, b_values): + if not (a == None or b == None): + a_new.append(a) + b_new.append(b) + return a_new, b_new, len(a_new) def common_keys(a_samples, b_samples): @@ -37,20 +33,10 @@ def common_keys(a_samples, b_samples): def normalize_values_with_samples(a_samples, b_samples): common_samples = common_keys(a_samples, b_samples) - a_new = {} b_new = {} for sample in common_samples: a_new[sample] = a_samples[sample] b_new[sample] = b_samples[sample] - num_overlap = len(a_new) - assert num_overlap == len(b_new), "Lengths should be the same" - - return a_new, b_new, num_overlap - - - -if __name__ == '__main__': - import doctest - doctest.testmod()
\ No newline at end of file + return a_new, b_new, len(a_new) |