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author | BonfaceKilz | 2022-03-23 17:10:14 +0300 |
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committer | BonfaceKilz | 2022-04-07 11:56:21 +0300 |
commit | b59e9201541cf308e9d46d710553e574cd0fb334 (patch) | |
tree | 63e31b1f08c3dfba7f2d47509eb786701e6d90b0 /wqflask/tests | |
parent | 36d2cbc96bd5219e044ce1728f750ceefd0fa5f6 (diff) | |
download | genenetwork2-b59e9201541cf308e9d46d710553e574cd0fb334.tar.gz |
Create a new page to display case-attributes and their descriptions
* wqflask/wqflask/metadata_edits.py: Import
"gn3.db.sample_data.get_case_attributes".
(show_case_attribute_columns): New function/ end-point to show
case-attributes.
* wqflask/tests/integration/wqflask/test_metadata_edits.py: New
integration tests for the above.
* wqflask/tests/integration/wqflask/__init__.py: New file.
* wqflask/wqflask/templates/case_attributes.html: New template file to
display the above.
Diffstat (limited to 'wqflask/tests')
-rw-r--r-- | wqflask/tests/integration/wqflask/__init__.py | 0 | ||||
-rw-r--r-- | wqflask/tests/integration/wqflask/test_metadata_edits.py | 41 |
2 files changed, 41 insertions, 0 deletions
diff --git a/wqflask/tests/integration/wqflask/__init__.py b/wqflask/tests/integration/wqflask/__init__.py new file mode 100644 index 00000000..e69de29b --- /dev/null +++ b/wqflask/tests/integration/wqflask/__init__.py diff --git a/wqflask/tests/integration/wqflask/test_metadata_edits.py b/wqflask/tests/integration/wqflask/test_metadata_edits.py new file mode 100644 index 00000000..4b9e017d --- /dev/null +++ b/wqflask/tests/integration/wqflask/test_metadata_edits.py @@ -0,0 +1,41 @@ +"""Tests for wqflask/wqflask/metadata_edits.py""" +import unittest +from unittest import mock + +from wqflask import app + + +class MetadataEditsTest(unittest.TestCase): + """Test Cases for MetadataEdits""" + + def setUp(self): + self.app = app.test_client() + self.app_context = app.app_context() + self.app_context.push() + + def tearDown(self): + self.app_context.pop() + + @mock.patch("wqflask.metadata_edits.get_case_attributes") + def test_show_case_attributes(self, mock_case_attrs): + """Test that case attributes are displayed correctly""" + mock_case_attrs.return_value = { + "Condition (1)": "", + "Tissue": "", + "Age": "Cum sociis natoque penatibus et magnis dis", + "Condition (4)": "Description A", + "Condition (5)": "Description B", + } + response = self.app.get( + "/datasets/case-attributes", follow_redirects=True + ).data.decode() + self.assertIn( + "<td>Condition (1)</td><td>No description</td>", response + ) + self.assertIn("<td>Tissue</td><td>No description</td>", response) + self.assertIn( + "<td>Age</td><td>Cum sociis natoque penatibus et magnis dis</td>", + response, + ) + self.assertIn("<td>Condition (4)</td><td>Description A</td>", response) + self.assertIn("<td>Condition (5)</td><td>Description B</td>", response) |