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authorBonfaceKilz2020-07-22 01:33:10 +0300
committerBonfaceKilz2020-07-24 03:47:43 +0300
commit01bbbc1ee82b43505e65446e4657ca7790453fdf (patch)
treeca7b22d3d7780cb02d4e4022653fbf870255161d /wqflask/tests
parent539e6ac3f211391cf241f2f2b70ed7dbd327fc28 (diff)
downloadgenenetwork2-01bbbc1ee82b43505e65446e4657ca7790453fdf.tar.gz
Add unittests for *utility/corr_result_helper*
Diffstat (limited to 'wqflask/tests')
-rw-r--r--wqflask/tests/utility/test_corr_result_helpers.py32
1 files changed, 32 insertions, 0 deletions
diff --git a/wqflask/tests/utility/test_corr_result_helpers.py b/wqflask/tests/utility/test_corr_result_helpers.py
new file mode 100644
index 00000000..e196fbdf
--- /dev/null
+++ b/wqflask/tests/utility/test_corr_result_helpers.py
@@ -0,0 +1,32 @@
+""" Test correlation helper methods """
+
+import unittest
+from utility.corr_result_helpers import normalize_values, common_keys, normalize_values_with_samples
+
+
+class TestCorrelationHelpers(unittest.TestCase):
+ """Test methods for normalising lists"""
+
+ def test_normalize_values(self):
+ """Test that a list is normalised correctly"""
+ self.assertEqual(
+ normalize_values([2.3, None, None, 3.2, 4.1, 5], [
+ 3.4, 7.2, 1.3, None, 6.2, 4.1]),
+ ([2.3, 4.1, 5], [3.4, 6.2, 4.1], 3)
+ )
+
+ def test_common_keys(self):
+ """Test that common keys are returned as a list"""
+ a = dict(BXD1=9.113, BXD2=9.825, BXD14=8.985, BXD15=9.300)
+ b = dict(BXD1=9.723, BXD3=9.825, BXD14=9.124, BXD16=9.300)
+ self.assertEqual(sorted(common_keys(a, b)), ['BXD1', 'BXD14'])
+
+ def test_normalize_values_with_samples(self):
+ """Test that a sample(dict) is normalised correctly"""
+ self.assertEqual(
+ normalize_values_with_samples(
+ dict(BXD1=9.113, BXD2=9.825, BXD14=8.985,
+ BXD15=9.300, BXD20=9.300),
+ dict(BXD1=9.723, BXD3=9.825, BXD14=9.124, BXD16=9.300)),
+ (({'BXD1': 9.113, 'BXD14': 8.985}, {'BXD1': 9.723, 'BXD14': 9.124}, 2))
+ )