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authorMunyoki Kilyungi2022-09-07 11:51:38 +0300
committerBonfaceKilz2022-09-08 14:26:19 +0300
commite3b7d9a24fb38397d4c393503463973d677925fb (patch)
tree6432ed44ce9f4770f095d2c1ccbc17085486b17b /wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
parentb6fadcc7e8de9d7041f2bb00dcd1ada518a1932c (diff)
downloadgenenetwork2-e3b7d9a24fb38397d4c393503463973d677925fb.tar.gz
Move test case to mrna_assay_tissue_data test module
* wqflask/tests/unit/base/test_mrna_assay_tissue_data.py * wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py (TestCorrelationFunctions.test_tissue_corr_computation): Delete. (TestCorrelationFunctions): Move this ... (test_mrna_assay_tissue_data_initialisation): ... here
Diffstat (limited to 'wqflask/tests/unit/base/test_mrna_assay_tissue_data.py')
-rw-r--r--wqflask/tests/unit/base/test_mrna_assay_tissue_data.py22
1 files changed, 22 insertions, 0 deletions
diff --git a/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py b/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
index 7a21124a..ecaa9def 100644
--- a/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
+++ b/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
@@ -49,3 +49,25 @@ def test_mrna_assay_tissue_data_initialisation(mocker, gene_symbols,
cursor.fetchall.return_value = sql_fetch_all_results
MrnaAssayTissueData(conn=mock_conn, gene_symbols=gene_symbols)
cursor.execute.assert_called_with(*expected_query)
+
+
+def test_get_trait_symbol_and_tissue_values(mocker):
+ """Test for getting trait symbol and tissue_values"""
+ mock_conn = mocker.MagicMock()
+ with mock_conn.cursor() as cursor:
+ cursor.fetchall.side_effect = [
+ (("k1", "203",
+ "112", "xy", "20.11",
+ "Sample Description",
+ "Sample Probe Target Description"),),
+ (("k1", "v1"),
+ ("k2", "v2"),
+ ("k3", "v3")),
+ ]
+ _m = MrnaAssayTissueData(conn=mock_conn,
+ gene_symbols=["k1", "k2", "k3"])
+ assert _m.get_symbol_values_pairs() == {
+ "k1": ["v1"],
+ "k2": ["v2"],
+ "k3": ["v3"],
+ }