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| author | zsloan | 2018-08-14 20:16:32 +0000 |
|---|---|---|
| committer | zsloan | 2018-08-14 20:16:32 +0000 |
| commit | 838362c116b02c090dadeb76cda27e9902a6626a (patch) | |
| tree | a6be104cc73e3bc9e271f9b5ca854dd32f3b810d /wqflask/maintenance/get_group_samplelists.py | |
| parent | 0bead53661ea701ffd9f9d565e4d2ecbbed81a8e (diff) | |
| parent | 85defabb17ecdef1c7b8e92fa2e06b44d1e9ca49 (diff) | |
| download | genenetwork2-838362c116b02c090dadeb76cda27e9902a6626a.tar.gz | |
Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into production
Diffstat (limited to 'wqflask/maintenance/get_group_samplelists.py')
| -rw-r--r-- | wqflask/maintenance/get_group_samplelists.py | 10 |
1 files changed, 0 insertions, 10 deletions
diff --git a/wqflask/maintenance/get_group_samplelists.py b/wqflask/maintenance/get_group_samplelists.py index 04e94886..1dc6c46c 100644 --- a/wqflask/maintenance/get_group_samplelists.py +++ b/wqflask/maintenance/get_group_samplelists.py @@ -6,16 +6,6 @@ import gzip from base import webqtlConfig -def process_genofiles(geno_dir=webqtlConfig.GENODIR): - print("Yabba") - #sys.exit("Dabba") - os.chdir(geno_dir) - for geno_file in glob.glob("*"): - if geno_file.lower().endswith(('.geno', '.geno.gz')): - #group_name = genofilename.split('.')[0] - sample_list = get_samplelist(geno_file) - - def get_samplelist(file_type, geno_file): if file_type == "geno": return get_samplelist_from_geno(geno_file) |