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| author | zsloan | 2020-10-29 14:35:09 -0500 |
|---|---|---|
| committer | zsloan | 2020-10-29 14:35:09 -0500 |
| commit | 7c1c9e2a519ba662e9f293eea73eb7922b2160e4 (patch) | |
| tree | f6d4db465d338c1433bbb126e911062a6c31748b /wqflask/maintenance/generate_kinship_from_bimbam.py | |
| parent | 5a1f69aa85809768577069ae63d92c9ef6aecc02 (diff) | |
| parent | 6e6911b466c2727b16a190d8b714f55d7842d7e2 (diff) | |
| download | genenetwork2-7c1c9e2a519ba662e9f293eea73eb7922b2160e4.tar.gz | |
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into reaper_bootstrap_fix
Diffstat (limited to 'wqflask/maintenance/generate_kinship_from_bimbam.py')
| -rw-r--r-- | wqflask/maintenance/generate_kinship_from_bimbam.py | 3 |
1 files changed, 1 insertions, 2 deletions
diff --git a/wqflask/maintenance/generate_kinship_from_bimbam.py b/wqflask/maintenance/generate_kinship_from_bimbam.py index b53f5dda..60257b28 100644 --- a/wqflask/maintenance/generate_kinship_from_bimbam.py +++ b/wqflask/maintenance/generate_kinship_from_bimbam.py @@ -8,7 +8,6 @@ and uses GEMMA to generate their corresponding kinship/relatedness matrix file """ -from __future__ import print_function, division, absolute_import import sys sys.path.append("..") import os @@ -58,4 +57,4 @@ if __name__=="__main__": Bimbam_Directory = """/export/local/home/zas1024/genotype_files/genotype/bimbam/""" GenerateKinshipMatrices.process_all(Geno_Directory, Bimbam_Directory) - #./gemma -g /home/zas1024/genotype_files/genotype/bimbam/BXD_geno.txt -p /home/zas1024/genotype_files/genotype/bimbam/BXD_pheno.txt -gk 1 -o BXD
\ No newline at end of file + #./gemma -g /home/zas1024/genotype_files/genotype/bimbam/BXD_geno.txt -p /home/zas1024/genotype_files/genotype/bimbam/BXD_pheno.txt -gk 1 -o BXD |