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| author | zsloan | 2019-10-18 14:33:37 -0500 |
|---|---|---|
| committer | zsloan | 2019-10-18 14:33:37 -0500 |
| commit | ed550f028b5db1fef57789d15c5f59a413f567f1 (patch) | |
| tree | f3196a83efccc641f3639f6688e9ca0b94428383 /wqflask/base | |
| parent | f35376bc9a44bf3a87a860a8aab00c3f091970ff (diff) | |
| download | genenetwork2-ed550f028b5db1fef57789d15c5f59a413f567f1.tar.gz | |
Added UniProt link and fixed issue that caused sample lists to not be formed correctly in certain situations
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/data_set.py | 1 | ||||
| -rw-r--r-- | wqflask/base/webqtlConfig.py | 1 |
2 files changed, 2 insertions, 0 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 41de8492..4df47083 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -912,6 +912,7 @@ class MrnaAssayDataSet(DataSet): 'blatseq', 'targetseq', 'chipid', 'comments', 'strand_probe', 'strand_gene', + 'proteinid', 'probe_set_target_region', 'probe_set_specificity', 'probe_set_blat_score', diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index 0b884815..9dddc63e 100644 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -56,6 +56,7 @@ ENSEMBLETRANSCRIPT_URL="http://useast.ensembl.org/Mus_musculus/Transcript/Idhist DBSNP = 'http://ensembl.org/Mus_musculus/Variation/Population?v=%s' PROTEIN_ATLAS_URL = "http://www.proteinatlas.org/search/%s" OPEN_TARGETS_URL = "https://genetics.opentargets.org/gene/%s" +UNIPROT_URL = "https://www.uniprot.org/uniprot/%s" # Temporary storage (note that this TMPDIR can be set as an # environment variable - use utility.tools.TEMPDIR when you |