diff options
| author | Alexander Kabui | 2022-09-08 14:04:29 +0300 |
|---|---|---|
| committer | GitHub | 2022-09-08 14:04:29 +0300 |
| commit | c9572f96f061a28b3c68f9572bd796ed560233aa (patch) | |
| tree | fc19dcb2f454ab5ac01e9b986a6f75b4330d14c0 /wqflask/base | |
| parent | 583e308f99dbcacce6a3c544689cc4b57a00378f (diff) | |
| parent | d467d314273b36189dd5936062f683fab57986f4 (diff) | |
| download | genenetwork2-c9572f96f061a28b3c68f9572bd796ed560233aa.tar.gz | |
Merge pull request #727 from Alexanderlacuna/feature/use-textfiles
use text files for Probeset
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/data_set.py | 3 | ||||
| -rw-r--r-- | wqflask/base/webqtlConfig.py | 5 |
2 files changed, 6 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 742eb61c..2f4c1154 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -1287,5 +1287,6 @@ def fetch_cached_results(dataset_name: str, dataset_type: str, samplelist: List) with open(file_path, "r") as file_handler: return json.load(file_handler) - except FileNotFoundError: + + except Exception: pass diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index 39947158..371a94ab 100644 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -7,7 +7,7 @@ # with those in utility/tools.py # ######################################### - +import os from utility.tools import valid_path, mk_dir, assert_dir, assert_writable_dir, flat_files, TEMPDIR # Debug Level @@ -95,6 +95,9 @@ if not valid_path(JSON_GENODIR): # fall back on old location (move the dir, FIXME) JSON_GENODIR = flat_files('json') + +TEXTDIR = os.path.join(os.environ.get( + "GNSHARE", "/gnshare/gn/"), "web/ProbeSetFreeze_DataMatrix") # Are we using the following...? PORTADDR = "http://50.16.251.170" INFOPAGEHREF = '/dbdoc/%s.html' |