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authorPjotr Prins2019-02-13 12:19:49 +0000
committerPjotr Prins2019-02-13 12:19:49 +0000
commitb6350b0d4cf6eb8002d40e86378d71e2823dacfb (patch)
tree6fa6716af822e613cb81171471819a469394cc6f /wqflask/base/webqtlConfig.py
parent5162d1484f01a51d65e7e70143146f018d96edb4 (diff)
parent27a08a81107705f213d13fb7334a2b8eb4fd68d2 (diff)
downloadgenenetwork2-b6350b0d4cf6eb8002d40e86378d71e2823dacfb.tar.gz
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into gn-testing
Diffstat (limited to 'wqflask/base/webqtlConfig.py')
-rw-r--r--wqflask/base/webqtlConfig.py4
1 files changed, 4 insertions, 0 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py
index 4708bf0a..c9052c83 100644
--- a/wqflask/base/webqtlConfig.py
+++ b/wqflask/base/webqtlConfig.py
@@ -34,6 +34,10 @@ PUBMEDLINK_URL = "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=
UCSC_BLAT = 'http://genome.ucsc.edu/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
UTHSC_BLAT = 'http://ucscbrowser.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
UTHSC_BLAT2 = 'http://ucscbrowserbeta.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
+GENOMEBROWSER_URL="https://genome.ucsc.edu/cgi-bin/hgTracks?db=%s&position=%s"
+NCBI_LOCUSID = "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=%s"
+ENSEMBLETRANSCRIPT_URL="http://useast.ensembl.org/Mus_musculus/Transcript/Idhistory?t=%s"
+DBSNP = 'http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=%s'
# Temporary storage (note that this TMPDIR can be set as an
# environment variable - use utility.tools.TEMPDIR when you