From 9cfb01cab4bcf6bf87ff8f7bfcf603ed349fbd87 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Wed, 24 Oct 2018 17:23:18 +0000
Subject: - SNP Browser is mostly complete; just need to test more and add SNP
 density chart if results exceed some number (5000 on GN1)

- Removed unnecessary options from the mode bar for the trait page Plotly figures and changed the default to highlight points the mouse is hovering over

- Changed some file/function names related to mapping, which previously were erroneously named "marker_regression"
---
 wqflask/base/webqtlConfig.py | 4 ++++
 1 file changed, 4 insertions(+)

(limited to 'wqflask/base/webqtlConfig.py')

diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py
index 4708bf0a..c9052c83 100644
--- a/wqflask/base/webqtlConfig.py
+++ b/wqflask/base/webqtlConfig.py
@@ -34,6 +34,10 @@ PUBMEDLINK_URL = "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=
 UCSC_BLAT = 'http://genome.ucsc.edu/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
 UTHSC_BLAT = 'http://ucscbrowser.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
 UTHSC_BLAT2 = 'http://ucscbrowserbeta.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s'
+GENOMEBROWSER_URL="https://genome.ucsc.edu/cgi-bin/hgTracks?db=%s&position=%s"
+NCBI_LOCUSID = "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=%s"
+ENSEMBLETRANSCRIPT_URL="http://useast.ensembl.org/Mus_musculus/Transcript/Idhistory?t=%s"
+DBSNP = 'http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=%s'
 
 # Temporary storage (note that this TMPDIR can be set as an
 # environment variable - use utility.tools.TEMPDIR when you
-- 
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