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author | Zachary Sloan | 2013-08-14 17:25:52 -0500 |
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committer | Zachary Sloan | 2013-08-14 17:25:52 -0500 |
commit | 26b1883a8fe4053b59833178f44e047157f2fc9c (patch) | |
tree | d2359e5952f6062d75ba1f43f1804a7b6df284c9 /wqflask/base/species.py | |
parent | eea1c38a9851f31011787b27c14365211a06ea51 (diff) | |
parent | 6379959af53b2ec595b85ccdc099c6f14adf0381 (diff) | |
download | genenetwork2-26b1883a8fe4053b59833178f44e047157f2fc9c.tar.gz |
Merge branch 'master' of https://github.com/zsloan/genenetwork
Diffstat (limited to 'wqflask/base/species.py')
-rw-r--r-- | wqflask/base/species.py | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/wqflask/base/species.py b/wqflask/base/species.py index 191f4535..ebc2bfed 100644 --- a/wqflask/base/species.py +++ b/wqflask/base/species.py @@ -56,6 +56,7 @@ class Chromosomes(object): InbredSet.Name = %s Order by OrderId """, self.dataset.group.name).fetchall() + print("group: ", self.dataset.group.name) print("bike:", results) for item in results: @@ -68,9 +69,14 @@ class Chromosomes(object): def set_mb_graph_interval(self): """Empirical megabase interval""" + if self.chromosomes: + self.mb_graph_interval = self.get_genome_mb_length()/(len(self.chromosomes)*12) + else: + self.mb_graph_interval = 1 + #if self.chromosomes: - assert self.chromosomes, "Have to add some code back in apparently to set it to 1" - self.mb_graph_interval = self.get_genome_mb_length()/(len(self.chromosomes)*12) + #assert self.chromosomes, "Have to add some code back in apparently to set it to 1" + #self.mb_graph_interval = self.get_genome_mb_length()/(len(self.chromosomes)*12) #else: #self.mb_graph_interval = 1 |