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authorFrederick Muriuki Muriithi2023-06-22 16:31:18 +0300
committerzsloan2023-06-22 10:18:31 -0500
commit971d29e82391cc269405f59b5aad5f31061b633d (patch)
treebfcb63ab18aebfa1aa13c3f7319ce28e734fceb6 /wqflask/base/data_set/probably_unused.py
parent18e2c59a2eb9b1bf952bec6ddfec0cd1abc7cc89 (diff)
downloadgenenetwork2-971d29e82391cc269405f59b5aad5f31061b633d.tar.gz
Update calls to `database_connection` function
Pass in the database URI at call time.
Diffstat (limited to 'wqflask/base/data_set/probably_unused.py')
-rw-r--r--wqflask/base/data_set/probably_unused.py3
1 files changed, 2 insertions, 1 deletions
diff --git a/wqflask/base/data_set/probably_unused.py b/wqflask/base/data_set/probably_unused.py
index 4e54bcff..abd3ad07 100644
--- a/wqflask/base/data_set/probably_unused.py
+++ b/wqflask/base/data_set/probably_unused.py
@@ -3,6 +3,7 @@
import pickle as pickle
from wqflask.database import database_connection
+from utility.tools import get_setting
def create_datasets_list():
if USE_REDIS:
@@ -19,7 +20,7 @@ def create_datasets_list():
'Geno': 'GenoFreeze'}
for dataset_type in type_dict:
- with database_connection() as conn, conn.cursor() as cursor:
+ with database_connection(get_setting("SQL_URI")) as conn, conn.cursor() as cursor:
cursor.execute("SELECT Name FROM %s",
(type_dict[dataset_type],))
results = cursor.fetchall(query)