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authorzsloan2015-03-27 20:28:51 +0000
committerzsloan2015-03-27 20:28:51 +0000
commitd0911a04958a04042da02a334ccc528dae79cc17 (patch)
tree3c48e2e937c1dbeaf00a5697c87ed251afa5c8f1 /web/index3.html
parenta840ad18e1fe3db98a359a159e9b9b72367a2839 (diff)
downloadgenenetwork2-d0911a04958a04042da02a334ccc528dae79cc17.tar.gz
Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'
Diffstat (limited to 'web/index3.html')
-rwxr-xr-xweb/index3.html443
1 files changed, 0 insertions, 443 deletions
diff --git a/web/index3.html b/web/index3.html
deleted file mode 100755
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-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
-<HTML><HEAD><TITLE>GeneNetwork Advanced Search</TITLE>
-<META http-equiv=Content-Type content="text/html; charset=iso-8859-1">
-
-<!-- WHAT ABOUT GENE ONTOLOGY SEARCHES? -->
-
-<!--NEED TO CLEAR TEXT BEFORE NEXT SEARCH? -->
-
-<!-- H2 only works for one data set: Do we keep it? -->
-
-<LINK REL="stylesheet" TYPE="text/css" HREF='css/general.css'>
-<LINK REL="stylesheet" TYPE="text/css" HREF='css/menu.css'>
-<SCRIPT SRC="javascript/webqtl.js"></SCRIPT>
-<SCRIPT SRC="javascript/dhtml.js"></SCRIPT>
-</HEAD>
-
-<!--  HEADER AND PULL DOWN MENU SECTION. This should match the main search page exactly   -->
-
-<BODY  bottommargin="2" leftmargin="1" rightmargin="1" topmargin="4" text=#000000 bgColor=#ffffff onload="javascript:initialDatasetSelection();">
-
-<TABLE cellSpacing=5 cellPadding=5 width="100%" border=0>
-	<TBODY>
-
-		<!--  TOP BANNER   -->
-		<TR>
-			<script language="JavaScript" src="/javascript/header.js"></script> 
-		</TR>
-	<TR>
-		<TD bgColor=#eeeeee class="solidBorder">
-		<Table width= "100%" cellSpacing=0 cellPadding=5 border="0"><TR align="left">
-	
-
-<!-- Body Start from Here -->
-		<TD vAlign="top" bgColor=#eeeeee ALIGN="center" WIDTH="550">
-			<P CLASS="title" ALIGN="left">&nbsp;&nbsp;&nbsp;&nbsp;Advanced Search  <a target="_blank" href="/webqtl/main.py?FormID=editHtml"><img border="0" valign="middle" alt="modify this page" src="images/modify.gif"/></a></P>
-			
-<!-- WE DO NOT NEED THESE BUTTONS HERE. PERHAPS THEY SHOULD BE MOVED TO GET ALL AND COMBINED BLOCKS-->
-
-<CENTER>
-			<Form METHOD="POST" ACTION="webqtl/main.py" ENCTYPE="multipart/form-data" NAME="SEARCHFORM">
-			<TABLE WIDTH="100%" ALIGN="center" BORDER="0" cellpadding="5" cellspacing="0">
-				
-				<TR>
-					<TD colspan="2" ALIGN="center" height=50>
-						<input type="Button" CLASS="button" value="Advanced Search" onclick="asearch(this.form);">&nbsp;&nbsp;
-						<INPUT TYPE="button" CLASS="button" VALUE=" Make Default " onClick = "setDefault(this.form);">
-					</TD>
-				</TR>
-				
-				<TR>
-					<TD ALIGN="right" HEIGHT="35">
-						<P><B>Species:</B></P>
-					</TD>
-					<TD NOWRAP>
-						<DIV Id="menu0">
-
-<!-- SPECIES ARE DYNAMIC FROM DB. WHY DO WE NEED THIS? -->
-
-						<Select NAME="species" size=1 id="species" onChange="fillOptions('species');">
-						</Select>
-						</DIV>
-					</TD>
-				</TR>
-				
-				
-				<TR>
-					<TD align=right height=35>
-						<P><B>Group:</B></P>
-					</TD>
-					<TD NOWRAP>
-						<DIV Id="menu1">
-						<Select NAME="cross" size=1 id="cross" onChange="fillOptions('cross');">
-						</Select>
-						<input type="button" class="button" value="Info" onCLick="javascript:crossinfo();">
-						</DIV>
-					</TD>
-				</TR>
-				
-				<TR>
-					<TD align=right height=35>
-						<P><B>Type:</B></P>
-					</TD>
-					<TD NOWRAP>
-						<DIV Id="menu2">
-						<Select NAME="tissue" size=1 id="tissue" onChange="fillOptions('tissue');">
-						</Select>
-						</DIV>
-					</TD>
-				</TR>
-				
-				<TR>
-					<TD align=right height=35>
-						<P><B>Database:</B></P>
-					</TD>
-					<TD NOWRAP>
-						<DIV Id="menu3">
-						<Select NAME="database" size=1 id="database">
-						</Select>
-						<INPUT TYPE="button" CLASS="button" VALUE="Info" onCLick="javascript:databaseinfo();">
-						</DIV>
-					</TD>
-				</TR>
-				
-				
-				
-				<TR align="center">
-				<TD colspan="2">
-				<HR align="center" size="1" width="100%">
-				</TD>
-				</TR>
-				
-				<TR>
-					<TD ALIGN="center" colspan="2">
-					<table ALIGN="center" width="100%" border="0" cellpadding="6" cellspacing="0">
-							<TR align="center">
-					<TD ALIGN="right" width="50">
-						<B>OR</B>
-					</TD>
-					<TD WIDTH="10">&nbsp;</td>
-					<TD>
-					<TABLE BORDER="0" cellpadding="6" cellspacing="0" WIDTH="100%">
-					
-					<TR>
-					<TD align="right"><B>Get Any:</B></td>
-					<TD>
-					<INPUT id="tfor" NAME="ORkeyword" STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" SIZE="30">
-					</TD>
-					</TR>
-					
-					<TR>
-					<TD colspan="2">
-					<HR WIDTH="100%" size="1"/>
-					</TD>
-					</TR>
-					
-					<TR>
-					<TD align="right">Position
-					</TD>
-					<TD>
-					<select name="any_position_chr">
- 
-<!--  WHAT ABOUT other Chromosomes such as UN, M, Y, Z, 21, 22, 23, 24 etc -->
-
-  <option value="Chr1">Chr1</option>
-  <option value="Chr2">Chr2</option>
-  <option value="Chr3">Chr3</option>
-  <option value="Chr4">Chr4</option>
-  <option value="Chr5">Chr5</option>
-  <option value="Chr6">Chr6</option>
-  <option value="Chr7">Chr7</option>
-  <option value="Chr8">Chr8</option>
-  <option value="Chr9">Chr9</option>
-  <option value="Chr10">Chr10</option>
-  <option value="Chr11">Chr11</option>
-  <option value="Chr12">Chr12</option>
-  <option value="Chr13">Chr13</option>
-  <option value="Chr14">Chr14</option>
-  <option value="Chr15">Chr15</option>
-  <option value="Chr16">Chr16</option>
-  <option value="Chr17">Chr17</option>
-  <option value="Chr18">Chr18</option>
-  <option value="Chr19">Chr19</option>
-  <option value="Chr20">Chr20</option>
-  <option value="Chr21">Chr21</option>
-  <option value="Chr22">Chr22</option>
-  <option value="ChrX">ChrX</option>
-  <option value="ChrY">ChrY</option>
-  <option value="ChrUN">ChrUN</option>
-  <option value="ChrZ">ChrZ</option>
-
-
-</select>
-					from
-					<input size="6" TYPE="text" STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_position_from">
-					to
-					<input size="6" TYPE="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_position_to">Mb
-					</TD>
-					</TR>
-					
-					<TR>
-					<TD ALIGN="right">Mean
-					</TD>
-					<TD>
-					from
-					<INPUT SIZE="6" TYPE="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" NAME="any_mean_from">
-					to
-					<INPUT SIZE="6" TYPE="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" NAME="any_mean_to">
-					</TD>
-					</TR>
-					<TR>
-					<TD align="right">Range
-					</TD>
-					<TD>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_range_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_range_to">
-					</TD>
-					</TR>
-					
-					<TR>
-					<TD align="right">Wiki
-					</TD>
-					<TD><input size="24" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_wiki"></td>
-					</TR>
-					
-					<TR>
-					<TD align="right">RIF
-					</TD>
-					<TD><input size="24" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_rif"></td>
-					</TR>
-					
-					<TR>
-					<td align="right">LRS</td>
-					<td>
-					from
-					<input SIZE="6" TYPE="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_lrs_from">
-					to
-					<input SIZE ="6" TYPE="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_lrs_to">
-					</TD>
-					</TR>
-					<TR>
-					<TD align="right">P</td>
-					<TD>
-					from
-					<input SIZE ="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_pvalue_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_pvalue_to">
-					</td>
-					</tr>
-					<tr>
-					<td align="right">H2</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_h2_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="any_h2_to">
-					</td>
-					</tr>
-					</table>
-					</TD>
-				</TR>
-					</table>
-					</TD>
-				</TR>
-				
-				<tr align="center">
-				<td colspan="2">
-				<hr align="center" size="1" width="100%">
-				</td>
-				</tr>
-				
-				<TR>
-					<TD align="center" colspan="2">
-					<table align="center" width="100%" border="0" cellpadding="6" cellspacing="0">
-						<TR align="center">
-					<TD align="right" width="50">
-						<b>AND</b>
-					</TD>
-					<td width="10">&nbsp;</td>
-					<TD>
-						<table border="0" cellpadding="6" cellspacing="0" width="100%">
-							<tr>
-					<TD align="right"><B>Combined:</B></td>
-					<TD>
-					<INPUT id="tfand" STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="ANDkeyword" size="30" />
-					</TD>
-				</TR>
-					
-				<TR>
-					<TD colspan="2">
-					<hr width="100%" size="1"/>
-					</TD>
-				</TR>
-					
-				<TR>
-					<TD align="right">Position
-					</TD>
-					<TD>
-					<select name="all_position_chr">
-  <option value="Chr1">Chr1</option>
-  <option value="Chr2">Chr2</option>
-  <option value="Chr3">Chr3</option>
-  <option value="Chr4">Chr4</option>
-  <option value="Chr5">Chr5</option>
-  <option value="Chr6">Chr6</option>
-  <option value="Chr7">Chr7</option>
-  <option value="Chr8">Chr8</option>
-  <option value="Chr9">Chr9</option>
-  <option value="Chr10">Chr10</option>
-  <option value="Chr11">Chr11</option>
-  <option value="Chr12">Chr12</option>
-  <option value="Chr13">Chr13</option>
-  <option value="Chr14">Chr14</option>
-  <option value="Chr15">Chr15</option>
-  <option value="Chr16">Chr16</option>
-  <option value="Chr17">Chr17</option>
-  <option value="Chr18">Chr18</option>
-  <option value="Chr19">Chr19</option>
-  <option value="Chr20">Chr20</option>
-  <option value="Chr21">Chr21</option>
-  <option value="Chr22">Chr22</option>
-  <option value="ChrX">ChrX</option>
-  <option value="ChrY">ChrY</option>
-  <option value="ChrUN">ChrUN</option>
-  <option value="ChrZ">ChrZ</option>
-</select>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_position_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_position_to">Mb
-					</td>
-					</tr>
-					<tr>
-					<td align="right">Mean</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_mean_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_mean_to">
-					</td>
-					</tr>
-					<tr>
-					<td align="right">Range</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_range_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_range_to">
-					</td>
-					</tr>
-					
-					<tr>
-					<td align="right">Wiki</td>
-					<td><input size="24" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_wiki"></td>
-					</tr>
-					
-					<tr>
-					<td align="right">RIF</td>
-					<td><input size="24" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_rif"></td>
-					</tr>
-					
-					<tr>
-					<td align="right">LRS</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_lrs_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_lrs_to">
-					</td>
-					</tr>
-					<tr>
-					<td align="right">P</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_pvalue_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_pvalue_to">
-					</td>
-					</tr>
-					<tr>
-					<td align="right">H2</td>
-					<td>
-					from
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_h2_from">
-					to
-					<input size="6" type="text"  STYLE="background-color:white;font-family:verdana; FONT-SIZE:14px" name="all_h2_to">
-					</td>
-					</tr>
-					</table>
-					</TD>
-				</TR>
-				</table>
-					</TD>
-				</TR>
-				
-				<tr align="center">
-				<td colspan="2">
-				<hr align="center" size="1" width="100%">
-				</td>
-				</tr>
-				
-				<TR>
-					<TD colspan="2" align="center" height=50>
-						<input type="Button" CLASS="button" value="Advanced Search" onclick="asearch(this.form);">&nbsp;&nbsp;
-						<input type="button" CLASS="button" value="Make Default" onClick = "setDefault(this.form);">
-					</TD>
-				</TR>
-
-				<tr>
-					<td colspan="2" align="right"></td>
-				</tr>
-				
-			</TABLE>
-			<INPUT TYPE="hidden" NAME="FormID" VALUE="asearchResult">
-			<INPUT TYPE="hidden" NAME="RISet" VALUE="BXD">
-			<SCRIPT SRC="/javascript/selectDatasetMenu.js"></SCRIPT>
-			</Form>
-			</center>
-		</TD>
-		
-		<td align="left" nowrap="nowrap" valign="top" class="">
-		<!-- index4.html help -->
-		<P class="title">
-		Help
-		<a href="index4.html" title="" target="_blank">open in new window</a>
-		</P>
-		<iframe scrolling="auto" src="index4.html" width="100%" height="930" align="top" frameborder="1"></iframe>
-		</td>
-		
-		</TR></TABLE>
-		</TD>
-	</TR>
-	<TR>
-		<TD align=center bgColor=#ddddff class="solidBorder">
-		<!--Start of footer-->
-		<TABLE width="90%">
-		<script language='JavaScript' src='/javascript/footer.js'></script>
-		</TABLE>
-		<!--End of footer-->
-		</TD>
-	</TR>
-	</TBODY>
-</TABLE>
-
-<!-- /Footer -->
-<script language="JavaScript" src="javascript/menu_new.js"></script>
-<script language="JavaScript" src="javascript/menu_items.js"></script>
-<script language="JavaScript" src="javascript/menu_tpl.js"></script>
-<script language="JavaScript">
-	<!--//
-	new menu (MENU_ITEMS, MENU_POS);
-	//-->
-</script>
-
-<script src="http://www.google-analytics.com/urchin.js" type="text/javascript">
-</script>
-<script type="text/javascript">
-_uacct = "UA-3782271-1";
-urchinTracker();
-</script>
-</BODY>
-</HTML>