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| author | root | 2012-05-08 18:39:56 -0500 |
|---|---|---|
| committer | root | 2012-05-08 18:39:56 -0500 |
| commit | ea46f42ee640928b92947bfb204c41a482d80937 (patch) | |
| tree | 9b27a4eb852d12539b543c3efee9d2a47ef470f3 /web/dbdoc/HXBBXHGeno.html | |
| parent | 056b5253fc3857b0444382aa39944f6344dc1ceb (diff) | |
| download | genenetwork2-ea46f42ee640928b92947bfb204c41a482d80937.tar.gz | |
Add all the source codes into the github.
Diffstat (limited to 'web/dbdoc/HXBBXHGeno.html')
| -rwxr-xr-x | web/dbdoc/HXBBXHGeno.html | 85 |
1 files changed, 85 insertions, 0 deletions
diff --git a/web/dbdoc/HXBBXHGeno.html b/web/dbdoc/HXBBXHGeno.html new file mode 100755 index 00000000..aa2cb42f --- /dev/null +++ b/web/dbdoc/HXBBXHGeno.html @@ -0,0 +1,85 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN"> +<HTML><HEAD><TITLE>RAE230A Microarray Kidney RMA April05 / +WebQTL</TITLE> +<META http-equiv=Content-Type content="text/html; charset=iso-8859-1"> +<LINK REL="stylesheet" TYPE="text/css" HREF='/css/general.css'> +<LINK REL="stylesheet" TYPE="text/css" HREF='/css/menu.css'> + +</HEAD> + +<BODY bottommargin="2" leftmargin="2" rightmargin="2" topmargin="2" text=#000000 bgColor=#ffffff> +<TABLE cellSpacing=5 cellPadding=4 width="100%" border=0> +<TBODY> +<TR> +<script language="JavaScript" src="/javascript/header.js"></script> +</TR> +<TR> +<TD bgColor=#eeeeee class="solidBorder"> +<Table width= "100%" cellSpacing=0 cellPadding=5><TR> +<!-- Body Start from Here --> +<TD valign="top" height="200" width="100%" bgcolor="#eeeeee"> +<P class="title">HXB/BXH Genotype <A HREF="/webqtl/main.py?FormID=editHtml"><img src="/images/modify.gif" alt="modify this page" border= 0 valign="middle"></A></P> + +<P class="subtitle"> Summary:</P> + +<Blockquote> + +The HXB/BXH Genotype Database was assembled by Robert W. Williams and Michal Pravenec using a compendium of approximately 1100 markers that have been typed over the past decade (please see Pravenec et al. <A HREF="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10730889&query_hl=2">1999</A> and Jirout et al.<A HREF="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12925886&query_hl=3">2003</A> for additional details of marker selection and genotyping). The final accepted genotype database contains 556 markers covering all 20 autosomes and the X chromosome. This file was updated November 2007 by RWW to correct some serious errors of maker order and to update the physical positions to the November 2004 assembly of the rat genome (still the most recent available to us). + +<P>We hope to obtain much improved SNP-based rat chromosome maps in the next year (2008) from Dr. Hubner, Pravenec, and colleagues. + +<P><A HREF="../genotypes/HXBBXH.geno" class="fs14"> Download</A> the entire HXB/BXH genotypes data set. + +<P>Pravenec M, Kren V, Krenova D, Bila V, Zidek V, Simakova M, Musilova A, van Lith HA, van Zutphen LF (<A HREF="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10730889&query_hl=2">1999</A>) HXB/Ipcv and BXH/Cub recombinant inbred strains of the rat: strain distribution patterns of 632 alleles. Folia Biol (Praha) 45:203-215. + +<P>Jirout M, Krenova D, Kren V, Breen L, Pravenec M, Schork NJ, Printz MP (<A HREF="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12925886&query_hl=3">2003</A>) A new framework marker-based linkage map and SDPs for the rat HXB/BXH strain set. Mammalian Genome 14:537-546. + +<P>File updated by RWW, Nov 28, 2007. +</BLockquote> + +</TD> +</TR></TABLE> +</TD> +</TR> +<TR> +<TD align=center bgColor=#ddddff class="solidBorder"> + + + +<!--Start of footer--> +<TABLE width="90%"> +<script language='JavaScript' src='/javascript/footer.js'></script> +</TABLE> +<!--End of footer--> + + + +</TD> +</TR> +</TABLE> +<!-- /Footer --> +<!-- menu script itself. you should not modify this file --> +<script language="JavaScript" src="/javascript/menu_new.js"></script> +<!-- items structure. menu hierarchy and links are stored there --> +<script language="JavaScript" src="/javascript/menu_items.js"></script> +<!-- files with geometry and styles structures --> + +<script language="JavaScript" src="/javascript/menu_tpl.js"></script> +<script language="JavaScript"> +<!--// +// Note where menu initialization block is located in HTML document. +// Don't try to position menu locating menu initialization block in +// some table cell or other HTML element. Always put it before </body> +// each menu gets two parameters (see demo files) +// 1. items structure +// 2. geometry structure +new menu (MENU_ITEMS, MENU_POS); +// make sure files containing definitions for these variables are linked to the document +// if you got some javascript error like "MENU_POS is not defined", then you've made syntax +// error in menu_tpl.js file or that file isn't linked properly. + +// also take a look at stylesheets loaded in header in order to set styles +//--> +</script> +</BODY> +</HTML> |