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authorzsloan2024-06-11 21:44:56 +0000
committerAlexander_Kabui2024-08-28 15:02:45 +0300
commitb8b0ff42bf79191c6f74227e5d946a573dd8de33 (patch)
tree8306e92b1807f43a077cae9651f43c6994103eb7 /gn2
parent03818e7eeff0eb1a5cae626531ba2359445528f9 (diff)
downloadgenenetwork2-b8b0ff42bf79191c6f74227e5d946a573dd8de33.tar.gz
Add doctstrings for new functions in search_results.py
Replace dataset name with fullname (this will need to be changed back when the Xapian indexing is rerun)
Diffstat (limited to 'gn2')
-rw-r--r--gn2/wqflask/search_results.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/gn2/wqflask/search_results.py b/gn2/wqflask/search_results.py
index 1add4fcd..0bdeb958 100644
--- a/gn2/wqflask/search_results.py
+++ b/gn2/wqflask/search_results.py
@@ -437,6 +437,7 @@ def get_alias_terms(symbol, species):
return alias_terms
def generate_xapian_request(dataset, search_terms, and_or):
+ """ Generate the resquest to GN3 which queries Xapian """
match dataset.type:
case "ProbeSet":
search_type = "gene"
@@ -453,8 +454,9 @@ def generate_xapian_request(dataset, search_terms, and_or):
"type": search_type}))
def create_xapian_term(dataset, term):
+ """ Create Xapian term for each search term """
search_term = term['search_term']
- xapian_term = f"species:{dataset.group.species} AND group:{dataset.group.name} AND dataset:{dataset.name} AND "
+ xapian_term = f"dataset:{dataset.fullname} AND "
match term['key']:
case 'MEAN':
return xapian_term + f"mean:{search_term[0]}..{search_term[1]}"